Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0368 ATGTCAATTTTGAGAGGAATTTGTGTGCTGAGAGTGGGTGTAGCAACTCCAAAACCTTACCTTCTTCCCTCAATCTTCTCGTCATCCTTCAATATTCATACCCTCTCACATACCACTTTTTCCAGAACCTTTCGTTTCCATCCACCTTCAATTTCTCTTTCATCCTTTGTGCCCCTCGTACCTCCCAAAGCAGCAGCCTCTTATGGCACTGGGAGTGGTGGTGCTGAAGGTGGTAGGCCAAGGGAACTATTGGTGCAGCATTTGTTGGTCAAAGAAGATGACCAGAAGCTTCTGTTGGATCTTCTGCAAAAAATCTCTTCAGGCGAAGATTTGAGTGATCTTGCTGTGGAACATTCACTTTGCCCATCCAAAGAAGAAGGAGGAATGCTTGGATGGGTCAAAAAGGGTCAAATGGTTCCTGAATTTGAGGAGGCTGCGTTCAGTGCACCTTTAAACAAAGTTGTAAAGTGCAAAACCAAATTCGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAATTCTTCAAGACATTCAACCTCATGAGCTGCATGGGAAAATTCAAGATCCCAATTTTTTGGAGGAGGCACAGCTAATTGACGTTCGAGAGCCTGAAGAAGTGGCTAAAGCATCTTTGCCAGGATTTACTGTTCTTCCCCTCCGACAATTTGGAAGCTGGGGGCCTGAAATAACTAAAAAACTTGACCCTGAAAAGGATATATACGTTATGTGTCATCATGGCATGCGATCATTACAGGTTGCCAGATGGTTGCTGTCACAGGGTTTCAGGAAAGTATACAATGTTTCTGGGGGAATCCATGCCTATGCTGTTCAGGTTGATCCATCAGTACCCACATACTGA 867 0.4441 MSILRGICVLRVGVATPKPYLLPSIFSSSFNIHTLSHTTFSRTFRFHPPSISLSSFVPLVPPKAAASYGTGSGGAEGGRPRELLVQHLLVKEDDQKLLLDLLQKISSGEDLSDLAVEHSLCPSKEEGGMLGWVKKGQMVPEFEEAAFSAPLNKVVKCKTKFGWHLLQVLSEREESILQDIQPHELHGKIQDPNFLEEAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITKKLDPEKDIYVMCHHGMRSLQVARWLLSQGFRKVYNVSGGIHAYAVQVDPSVPTY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0368 288 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 80 170 IPR000297 GO:0003755
Vra6g0368 288 Pfam PPIC-type PPIASE domain 91 170 - -
Vra6g0368 288 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 288 - -
Vra6g0368 288 SUPERFAMILY FKBP-like 79 169 - -
Vra6g0368 288 ProSiteProfiles Rhodanese domain profile. 194 286 IPR001763 -
Vra6g0368 288 Pfam Rhodanese-like domain 184 278 IPR001763 -
Vra6g0368 288 Gene3D - 80 173 IPR046357 GO:0003755
Vra6g0368 288 SMART rhod_4 180 283 IPR001763 -
Vra6g0368 288 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 176 286 IPR036873 -
Vra6g0368 288 CDD RHOD_2 179 282 - -
Vra6g0368 288 Gene3D - 174 285 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0368 81 288 Sulfurtransferasese or Rhodanese AT5G19370 66.346 1.02e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0368 - - gmx:100803404 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0368 6 2880288 2884367 Vra6g0368 6 2880288 2884367 ECH