Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0320 ATGCCGAGGAGTGTGTTCTCCTTCATGATCCGTTTCTTCTTCCGATCCTTCACCAGAGTAATGGGCTGCTTCTTCGCTTGCTTCCGGATCAGAGACACTCGCCGTACGCACACACCGCAATTGATTTCCACCACCAATCGTTCCAACGCTGTTGTGACATCTCGGAACAGCTTGCCTTCTTTATTAACTGAAGAAGAGAGAGATGATTCTGCTCGGATCGATGGGATGGAGTTTCAGGGAGAATTCCAGGGACTCAAGGACGAGGCTAAGTTTCTTAAAGCTTGTGGGACCTTAACAGGAACACCTATTGAAATTCGCAAAGCATCTGAGAAATTGAAAAAATCACCATCTCCTGATCATGATTCTGACCCTTCAAGATTTCATTCTTGGCTTCCTAATACGTCTTTTGAGAAACTGCAGCCGGATGTCCAACCATTTGATCCACCAACTCCGATAAAACCTTGCCATGAGTGGGGAAATAGCATGAATTCATTTGAACACACATCAAATAGTTGCGTCTCCAAAGCACAAGATACTCGCGATGACTCTGTTGACTATATAGAAAAAAGTTGTGCAGGGAACCCTCATAGGGAAGATATTTCTGAAAGGAATGCAGCTTTAGTTTCACCTCTGCTACCCTCAAATACTCAGAGAAAGAACAAGTCTGTTCGTTTTGAAAGAGAAACTGACTTGGTATCCTACGGAAGCTCATCAAACGATTGGCATATGAAAGAAAACAAATCACCAAACAATCAAAGTGCATATAAACAATCTCCTTATCCTACCCCGTTGAAGTTATTCGATGAGATGCAAACACCAGGAACTGTGTATCCTGCATCGTTAGAAGAGTTACGTAGTGGCAAGGCTAAGGTTCGGTCCCAGTTTGTCTATCCAACTAACAATCGAGGTGATAATGCCTTCCGATGCAAAATACTAGAGGCTGGGGATTTTAGTTCCGAAGAAGATTCAAGTGAGCTGAGTAATTTGGTTGAGCAATCTCAAAATGGAACTCCTACCCCAGAACAAGGGTTGAAGAAAATTTCAGATGGATATGACAATGAGGAGAAATCAATTTTGTCTGCTAGATTAACTCCTCTGTCAATCATTGATGAGCATTCTCCCATTTCTCTTAAGTGGTGGTATGGCAATGGCATCCCGAATTCCACAACTAAGTACAAGGAGGACCAGAAAGTGAAATGGCATGCAACCCCGTTTGAAGAAAGGCTGGATAAGGCACTGTCTGAGAATGTTATATCTCAAAGGAAGCTTGTTCGAGGGAAACCGGTGGAATTTGATGACATTGAAGAAAATGATAGTGCATCATCTCAGCGGCTATAG 1338 0.429 MPRSVFSFMIRFFFRSFTRVMGCFFACFRIRDTRRTHTPQLISTTNRSNAVVTSRNSLPSLLTEEERDDSARIDGMEFQGEFQGLKDEAKFLKACGTLTGTPIEIRKASEKLKKSPSPDHDSDPSRFHSWLPNTSFEKLQPDVQPFDPPTPIKPCHEWGNSMNSFEHTSNSCVSKAQDTRDDSVDYIEKSCAGNPHREDISERNAALVSPLLPSNTQRKNKSVRFERETDLVSYGSSSNDWHMKENKSPNNQSAYKQSPYPTPLKLFDEMQTPGTVYPASLEELRSGKAKVRSQFVYPTNNRGDNAFRCKILEAGDFSSEEDSSELSNLVEQSQNGTPTPEQGLKKISDGYDNEEKSILSARLTPLSIIDEHSPISLKWWYGNGIPNSTTKYKEDQKVKWHATPFEERLDKALSENVISQRKLVRGKPVEFDDIEENDSASSQRL* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0320 445 MobiDBLite consensus disorder prediction 107 126 - -
Vra6g0320 445 MobiDBLite consensus disorder prediction 322 342 - -
Vra6g0320 445 MobiDBLite consensus disorder prediction 234 259 - -
Vra6g0320 445 MobiDBLite consensus disorder prediction 234 266 - -
Vra6g0320 445 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 13 442 IPR039300 GO:0007142
Vra6g0320 445 PANTHER - 13 442 - -
Vra6g0320 445 MobiDBLite consensus disorder prediction 107 128 - -
Vra6g0320 445 MobiDBLite consensus disorder prediction 322 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0320 Vra-Chr6 2384856 2388561 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0320 - - gmx:100799259 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0320 6 2384856 2388561 Vra6g0320 6 2384856 2388561 ECH
Vra6g0320 6 2384856 2388561 Vra6g0329 6 2482787 2487514 PCT