Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0316 ATGGAAAAACATGGTGAGGAAGAAGAGTTTGATGGTTTCAGCTACGATGTGTTCATTAGTTTTAGAGGTGAAGATGCTGGGAAAAATTTTGTAGGACATCTCCGTAGAGAGTTGGGTAGGGAGGGAATAAACACATTCAATGATGACAGGGATATGAGGACAGAGGAAGGTCTTTCACCAGCTGTGTGTGAGGCCATTGAAGAATCTAATATTTTCATAGTTGTGTTTTCTGAGAACTATGCATCTTCCACGTGGTGTCTGGATGAACTTGTTAAGATTATCCAACGCACCCACATCAACAGTAAGCAAGTTGTTTACCCAGTGTTCTACCATGTAGATCCCTCAGATACAAGGAAAATAAAAGATAGTTTCGAAAAACACATGATGGCACACGAAAATGAGATTGGAAAAGAGTCGCAGAGAATACAAGCTTGGAGGTCTGCTTTGTTTGAAGCAGCTAGCTTGCCAGGGATGCATGTTCCCACCGGGAATGATGAAAACGATATTATTGAAAAAATTGTTGAAAAGGTTCGTAGAAGCATAGCTCCTAAACCTTTATATACGGGTGAAAATGTTGTTGGACTGAAGCCCCGAGTAGAAGAGGTTATGTCACTTTTGGACATGAAGCCTAATGACAAAACTGTAAGGATGTTGGGCATATATGGACTTGGTGGAATTGGAAAAACAAAACTTGCAAAAGCTTTGTATGATAAAATTGTGCACAACTTTGATGCTGCAAGTTTTCTTGCCGATGTTAGAGAAAACTCAAAAAGAATCAATGGCATGGAAGATCTACAAAAGACACTTTTATCTGAGATGTTTGAGGAGTTGGAAACTGAATTGGGAAGTGCATATAAAGGAATATACGAAATAAAACGAAAGCTCCACCGGAAGAAACTTCTTTTGGTTCTTGACGACGTTGATGATAAAGAAGAGTTAGAAAAGTTGGCAGGAGGGTGTGATTGGTTTGGTCCAGGTAGTAGGATCATTGTAACCACAAGGGAAAAAGATGTCCTAAATGCTCACCATGTTGGAAATATTTATGAAATGAAGGAACTTGATGAACAACATTCTTTAGAGCTCTTTTGTTGGAATGCCTTCGGACAAGGTTGTCCTAAAACAGGTTTTCAAGATGTGTCCGTGCGTGCTGCAGGTTACGCCAAAGGTGTTCCACTGGCTATACAGGTGATAGCCTCTGACTTAGCTAATCTTCATGAAGAAAGTTTAGATGCCTGGGAAGATGCATTGGAAGAATACGAGAAGACTCCTTCAAAGAAAGAGATTCAAGATGTGCTTAAAATAAGCTACGATAGATTGGATGTTGATGCCAAACAAGTTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAATGGAATATGTGAAAAAGATACTTAAGGAATTTTGTTCAACATCCAACATGAAAGTACTTGTCAATAAATCACTCATAACTATCGAGAATGACAGGCTGAAGATGCATGATCTAATACAAGATATGGGTAGACAGATTGTTAGGCAGGAAGCACCAGATAATCCTGGACAACGTAGCAGAATATTGGATTACGAAGATGTTATTGAAATACTAACGAAAGATTCGGGAAGTGATAAGATTCAAGGGATTAAGCTAGATCCTCCTAAGCAAGCAGAAGTAAAATGGAGTGGAACTGAGTTTGGGAAAATGAAATGGCTCAGAATTCTAATTGTTCGAAACACATCCTTTTCATCTGAACTTCAACATTTACCAAATCATTTAAGACTACTTCACTGGGACAACTATCCTTCAAAGTCTTTCCCCCAAAAATTCCATCCAAAGAAAATCGTTGTTTTCAATTTGCCTAGAAGTTCTCTAACATTCCAAGACCCATTCAAGAAATTTCCATGCTTGACTAATATGGACTTTTCATATAACCAACGTATCATCGAAATACCTGATGTGTCTGAACTTCAGAATCTAAGAGAACTGAGACTTGATCATTGTAGAAACCTAATTGCAGTCCATCAATCTGTTGGATTTTTGAAAAAGCTTTCTCATTTAAGTGTTTCAGAATGCACAAAACTTCAAAACTTCCTGTCCAGAATGTTTCTACCATCTTTAGAAGTTTTTGATCTTAATCTATGTGAAAGAGTTGGTCACTTCCCAGAGATAATGCAAGAAATGACAAAGCCATTGAAGATTTATATGATAAATACGGGTATTCAAGAGCTTCCGGAATCCATTAGTAAACTTATTGGGCTTGTTTTTATAGACATATCGAATAACAGGCAACTTAAATATCTGCCAAGCAGCTTATTCATGTTGCCAAATGTTGATTCCTTCAAAATCGAAGCATGTTCGAAACTTGGACAATCCTTCAGAAGTTTGGTTCAACACCCTTCAAAAGTCAATGTTCGTCCGAAATTACGATCACTGAATTTTCAAAAGGGTAACTTGTCTGATGAAGATCTTCTTGCGATTCTTTGCTACTTTCCGAAATTGGAAGAATTGATTGTTTCAGAGAACAATTTTGTATATATCCCTTCATGCATCAAGGAATGTGGTGACTTGACAAGTCTCGATTTGAATGGATGTAAGAAGCTTAAAAAAATTCCAGAACTCACTAGCTTGAGAATTCTTGATGTTCATCATTGTTCAGACCTTGAAGAAATTTCAGAGTTGCCGTCTACTGTTGAGAAAGTAGATGCAAGATTTTGTTTCAAGTTAACAAAAGAGACATCAGACATGCTATGGTGTCAGGTGAAGAAAGGGGTTGGTGGAATTGAAATGGTGATGCCACTTATAACTGAGATTCCAGAATGGTTTAATTTTGTGGAGGTCGGAACGATTCCGGGTTTCTGGGTTCGTGGCAAGTTCCCTAACATTGTTCTAGCCATGATCTTCCACTTCCCAAATCAGAGTCAAAGCGACGAATTTGTTCGCCGTCGCCATGTTGATCTGCGTTTAGTTATCAACGGTCGAAATGCTTTTGGCAAAGGGTATCACAACTTTATAATTGAAGCAGGACACGTGTTGATCTGTGATCTACGAGTTTTGTTCAGTGAGAAGGAGTGGTTTGGCCTTGATGCACTTCTGGAGAAGGAGTGGAATGTGGTGCAGGTTGAGTATGAAGCCACTTCGTCCTTGATGATAAGTAGTTGGGGAGTGTTTTTGTATGAAGAAGGAAGCAATATGGAAGATCTCCTATTCAATTGTCCCAATCACATGGACTCAGAGAAGATGCCACCGGCAATAGTTCCTGAGAAAGATCCTATGGAGAAATATAGAAAGATGATACGCGAGCTACGTCTGGACGAAACATTTAAGAACACGTTGACGGAATGGCAGGAGGACAAAGAAAGAGGAGGGGCGGGGGTTCATGACGATTGCATCCGTACGGTATTGGGAGAATCTAAGAAGATATCAAAGGATGCTGAGGATGCATTGAAATCAAATGGGTCAGCTTTAGAAGATCCAAACTCCTACCTAAGGTGGCTTCTAGATACGGTAGAAAATGATGACGGAAAGCCTAAAGTGATTTTCAAAGATGATCTGGCGTTGATAAGACTAGAGGAACCAGTGACAGGGAAGAAGAAGGATAACGTAGGAGAAGCTTCAAGCTCTGGCCATCAGGAAAGCAAGGAGGAGGAAGAAGGCTACGATATCCCTTTTTATACTAATTTTGTTGTCAGAAAACAAACAGTAGACGATTCTCTGCCGGAGGACATAGTGATGGAATTATTGTGTGAAGGAATGAGGGATGGACTTGTTGAGGCACAGAATGGATTTCCTTCTCTAGATATTGCTGAAACCAGTAACGCTGTGTTGGAGAAGGGTGATAAGGTTAGATGGGCACCTGAAGTAGAAGAGCAAATATCGGTGGAAAGTAGGATATACATGACTGGAATTTACTCTGGACTCAAAGAAGCAAAGCTGAGGTTTCCTGATTTGGACATCTGGGCAACAATAAATACTGTGGCAAAAAGGAAAGGGATCGAAGGAATTTTTGTATCAGCCTCTCAAGAAAAGCTGGGGTTCCCACATTTGGATTGGAGTACAGTGAAAGTTCCTCCTTCTGAGGACCCTCTGATGCAAATATTCATGAAGATGAAGCAACAAAGTAATTTTGAAGGCGAGGTGATGAATAAACTGTTCTGGAAGTTGAAGGAGGAACACGAAGTTCTGCGCAACAAATTTGCAGAACTTGATGATGGAAATGAAAATGAATATGATGAGTGTGTTAAGAAGAGAGAAGAGAAGCTTGATGGTGTGGGAAAATATGAAGAGATTAGTGGTGTTTTGAGAGAAAGAGGTGAAGAAATAGAAAGGCTGTACGATGCTGGGGTTGAAGGATTCAAGAGATCAGAAGAGTTTGAAGATGTGATGGGTGCAATATACTTGAATGGGCTTAGGGCAGGACTCCTTGAAGCACAGGCTCTCTTACTTAATCTCCTTACTCCACACAGAAACTGA 4449 0.3972 MEKHGEEEEFDGFSYDVFISFRGEDAGKNFVGHLRRELGREGINTFNDDRDMRTEEGLSPAVCEAIEESNIFIVVFSENYASSTWCLDELVKIIQRTHINSKQVVYPVFYHVDPSDTRKIKDSFEKHMMAHENEIGKESQRIQAWRSALFEAASLPGMHVPTGNDENDIIEKIVEKVRRSIAPKPLYTGENVVGLKPRVEEVMSLLDMKPNDKTVRMLGIYGLGGIGKTKLAKALYDKIVHNFDAASFLADVRENSKRINGMEDLQKTLLSEMFEELETELGSAYKGIYEIKRKLHRKKLLLVLDDVDDKEELEKLAGGCDWFGPGSRIIVTTREKDVLNAHHVGNIYEMKELDEQHSLELFCWNAFGQGCPKTGFQDVSVRAAGYAKGVPLAIQVIASDLANLHEESLDAWEDALEEYEKTPSKKEIQDVLKISYDRLDVDAKQVFLDIACFFKGERMEYVKKILKEFCSTSNMKVLVNKSLITIENDRLKMHDLIQDMGRQIVRQEAPDNPGQRSRILDYEDVIEILTKDSGSDKIQGIKLDPPKQAEVKWSGTEFGKMKWLRILIVRNTSFSSELQHLPNHLRLLHWDNYPSKSFPQKFHPKKIVVFNLPRSSLTFQDPFKKFPCLTNMDFSYNQRIIEIPDVSELQNLRELRLDHCRNLIAVHQSVGFLKKLSHLSVSECTKLQNFLSRMFLPSLEVFDLNLCERVGHFPEIMQEMTKPLKIYMINTGIQELPESISKLIGLVFIDISNNRQLKYLPSSLFMLPNVDSFKIEACSKLGQSFRSLVQHPSKVNVRPKLRSLNFQKGNLSDEDLLAILCYFPKLEELIVSENNFVYIPSCIKECGDLTSLDLNGCKKLKKIPELTSLRILDVHHCSDLEEISELPSTVEKVDARFCFKLTKETSDMLWCQVKKGVGGIEMVMPLITEIPEWFNFVEVGTIPGFWVRGKFPNIVLAMIFHFPNQSQSDEFVRRRHVDLRLVINGRNAFGKGYHNFIIEAGHVLICDLRVLFSEKEWFGLDALLEKEWNVVQVEYEATSSLMISSWGVFLYEEGSNMEDLLFNCPNHMDSEKMPPAIVPEKDPMEKYRKMIRELRLDETFKNTLTEWQEDKERGGAGVHDDCIRTVLGESKKISKDAEDALKSNGSALEDPNSYLRWLLDTVENDDGKPKVIFKDDLALIRLEEPVTGKKKDNVGEASSSGHQESKEEEEGYDIPFYTNFVVRKQTVDDSLPEDIVMELLCEGMRDGLVEAQNGFPSLDIAETSNAVLEKGDKVRWAPEVEEQISVESRIYMTGIYSGLKEAKLRFPDLDIWATINTVAKRKGIEGIFVSASQEKLGFPHLDWSTVKVPPSEDPLMQIFMKMKQQSNFEGEVMNKLFWKLKEEHEVLRNKFAELDDGNENEYDECVKKREEKLDGVGKYEEISGVLRERGEEIERLYDAGVEGFKRSEEFEDVMGAIYLNGLRAGLLEAQALLLNLLTPHRN* 1483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0316 1482 Gene3D - 352 440 IPR042197 -
Vra6g0316 1482 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 1048 - -
Vra6g0316 1482 PRINTS Disease resistance protein signature 217 232 - -
Vra6g0316 1482 PRINTS Disease resistance protein signature 294 308 - -
Vra6g0316 1482 PRINTS Disease resistance protein signature 387 401 - -
Vra6g0316 1482 PRINTS Disease resistance protein signature 864 880 - -
Vra6g0316 1482 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 1048 IPR044974 GO:0006952
Vra6g0316 1482 SUPERFAMILY L domain-like 492 885 - -
Vra6g0316 1482 Gene3D Ribonuclease Inhibitor 551 726 IPR032675 -
Vra6g0316 1482 Gene3D Ribonuclease Inhibitor 727 910 IPR032675 -
Vra6g0316 1482 Coils Coil 402 422 - -
Vra6g0316 1482 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Vra6g0316 1482 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Vra6g0316 1482 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Vra6g0316 1482 Gene3D - 178 346 IPR027417 -
Vra6g0316 1482 Pfam TIR domain 15 177 IPR000157 GO:0007165
Vra6g0316 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 450 IPR027417 -
Vra6g0316 1482 MobiDBLite consensus disorder prediction 1190 1210 - -
Vra6g0316 1482 Gene3D - 12 177 IPR035897 -
Vra6g0316 1482 SMART till_3 14 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0316 Vra-Chr6 2355134 2361049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0316 15 830 WRKY Transcription Factor Family AT4G12020 30.641 6.45e-98 346