Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0293 ATGGAGTTTCCAATGATGCTGCTGAGGCTTGCAGAGTGGGTGCTGTACCAGCTGCTTGCCAACTCTTACTATAGAGCAGCAAGAAAAATGAAAAGTTATGGGTTCCATTTCGGGTATTTGTCATCCAAACCACCCCCTCAACCTTCCTCTTTCCCTAGTGTTGTCAAATATGATTTTGAGAGTAGAGAGTCTCAGACACTTGTGGCTTGTGACATTCATAGAGTCCTTTTGAGGTCCCACTCTTTCTTTCCTTATTTCATGCTTGTTGCCTTTGAAGGTGGCAGCATTTTCAGAGCATTCCTCTTGCTTTTGTCTTGTCCTGTGTTGTGGATTTTGAACCACGAGCTAAGGCTTAAGGTCATGACTTTTATCACCTTTTGTGGGCTAAGAACAAATGCCATGGATAGTATATCAAGGGCGGTTTTACCCAAGTTTTATTTGGAGAATCTCAACCTTCATGCTTACGAGGTTCTGGCCTCAGCAGGGTCTAAAGTTGTCTTCACGAGTGTGCCTAGAGTTATGGTGGAAGGGTTTCTTAAGGAGTATTTGAGCGTTGATGCTGTTGTAGGCACGGAGTTGCACACTGTTGGTTGCTACTTCAGTGGTTTGCTTTCTGGTTCTGGTTTACTTGTGAAGCACAGAGCACTGAAGGATTATTTTGGAGACACAAAACCTGATATTGGTGTTGGAAGTTCTGCTGTTCATGATCATCTTTTCCTCTCCCTTTGCAAGGAAGCATATGTGGTGAACAATGAAGAGAGCAAGAACAACTTTAGCTCAGTGATGCCAAGGGACAAATATCCAAAGCCCTTAATATTTCATGATGGAAGACTAGCATTCCTGCCTACACCCTCAGCAGCTCTGGTTATGTTCATGTGGTTTCCATTTGGAATTCTTTTGGCCATTTATAGGATCCTTCTAGGCATTCTACTTCCTTATGGATGGGCATTGTCATTAGGGGTTTGGAGTGGCTTAAATCTCCAAATCAAAGGGATTCTCCCTGAAAAGTCAGAGCAAAAGCAAGGGGTCCTATATGTTTGCACTCACAGGACTCTTCTTGATCCTGTTTTCCTAAGCACATGTTTGGCAAAGCCTTTGACTGCAGTGACATACAGCTTGAGTAAGGTGTCTGAGTTGATAGCCCCTATAAGGACAGTGAGACTAACAAGGGACAGAAAAAAAGATGGTGAAACAATGCAAAGGCTTCTGAGAGAAGGGGATTTGGTGGTGTGTCCTGAAGGAACAACTTGTAGGGAACCATATTTACTGAGGTTCAGCTCACTTTTTGCAGAATTGGCTGATGAGATTGTGCCTGTTGCTATCAATACTCATGTGAGCATGTTCTATGGGACCACTGCAAGCGGGTTGAAATGCTTGGACCCTATTTTCTTTTTCATGAATCCAAGGCCTAGCTGTTACATTCAGGTTCTTGGAAAACTTCCCAGAGAACTTACATGTGCTGGAGGAAGATCAAGCTGTGAAGTCGCAAACTTTATACAGAAACAGTTAGCCGATGCTTTGGGATTTGAGTGCACCACACTCACAAGGAGGGATAAGTACATGATGCTGGCAGGGAATGAAGGGATTGTCCAACAAGACAAGAGGACAACAAAATGTTAA 1620 0.4346 MEFPMMLLRLAEWVLYQLLANSYYRAARKMKSYGFHFGYLSSKPPPQPSSFPSVVKYDFESRESQTLVACDIHRVLLRSHSFFPYFMLVAFEGGSIFRAFLLLLSCPVLWILNHELRLKVMTFITFCGLRTNAMDSISRAVLPKFYLENLNLHAYEVLASAGSKVVFTSVPRVMVEGFLKEYLSVDAVVGTELHTVGCYFSGLLSGSGLLVKHRALKDYFGDTKPDIGVGSSAVHDHLFLSLCKEAYVVNNEESKNNFSSVMPRDKYPKPLIFHDGRLAFLPTPSAALVMFMWFPFGILLAIYRILLGILLPYGWALSLGVWSGLNLQIKGILPEKSEQKQGVLYVCTHRTLLDPVFLSTCLAKPLTAVTYSLSKVSELIAPIRTVRLTRDRKKDGETMQRLLREGDLVVCPEGTTCREPYLLRFSSLFAELADEIVPVAINTHVSMFYGTTASGLKCLDPIFFFMNPRPSCYIQVLGKLPRELTCAGGRSSCEVANFIQKQLADALGFECTTLTRRDKYMMLAGNEGIVQQDKRTTKC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0293 539 Pfam Acyltransferase 334 436 IPR002123 GO:0016746
Vra6g0293 539 CDD LPLAT 313 504 - -
Vra6g0293 539 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 19 533 - -
Vra6g0293 539 SMART plsc_2 343 444 IPR002123 GO:0016746
Vra6g0293 539 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 266 531 - -
Vra6g0293 539 PANTHER ANCIENT UBIQUITOUS PROTEIN 19 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0293 Vra-Chr6 2190618 2193058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0293 1 531 Acyl Lipid Metabolism Gene Families AT1G06520 57.797 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0293 K13508 - gmx:100803875 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0293 6 2190618 2193058 Vra6g0218 6 1619825 1622230 PCT