Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0290 ATGTCATCATCCATGGAACAAGAAGATAACACCCCAAAGCACACTATCATACCCACATTACTCAGAAAACCTTCAGACGACCAGGCCAACTCCGCCGTCTCCTCTCACAAATCTTTGCATGTTTTCCGCCACAGCAGGAGGCGGTGTAGGAAGGAACTCACTGCGAAAGAGCCTGCCAAGGAAGGTAATGAAGATGAGGAGAAAGAAAAAGAAGAAGATGAAGATGATGGTGACGTTGATGACAGAGAAGAGATAGAGAGGAAGATTCATGCATTGCAGAGGATTGTGCCAGGTGGGGAGTCATTAGGGGTGGACAAACTCTTTGATGAAACTGCTGGCTATATTCTGGCCTTGCAGTACCAAGTCAAAGCCTTGAGGGCTCTCACTGGTTTCTTTGAGAAGTTGGAGAAGGAGAAGACAAAGTTTGGAGGTTGA 435 0.4667 MSSSMEQEDNTPKHTIIPTLLRKPSDDQANSAVSSHKSLHVFRHSRRRCRKELTAKEPAKEGNEDEEKEKEEDEDDGDVDDREEIERKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALRALTGFFEKLEKEKTKFGG* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0290 144 MobiDBLite consensus disorder prediction 66 81 - -
Vra6g0290 144 MobiDBLite consensus disorder prediction 51 65 - -
Vra6g0290 144 MobiDBLite consensus disorder prediction 1 85 - -
Vra6g0290 144 PANTHER TRANSCRIPTION FACTOR PAR1 38 142 - -
Vra6g0290 144 MobiDBLite consensus disorder prediction 24 38 - -
Vra6g0290 144 CDD bHLH_AtIBH1_like 85 129 IPR044549 GO:0006355
Vra6g0290 144 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 38 142 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0290 82 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.809 4.91e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0290 - - pvu:PHAVU_008G191400g 172.94