Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0263 ATGAATCTTCTTTTGTTGGGTTTTCTCTTCTTCATCCCAATCTTTCTTCTGCTGAGAAGAGGAAGAAACCCCTCTAAAAGGGTTCCTCCTGGTTCACTTGGAATACCTATTATTGGCCAAAGTCTTGGCCTTCTTCGAGCTATGCGTGCCAACACCGCAGAAAAATGGGTTCAAGAAAGAATCAGCAAGTATGGTCCCATTTCAAAGCTAAGCCTATTCGGAAAACCAACAGTGTTAATCTATGGACAGGCTGCAAATAAGTTTATATTCTCTAGTGGCGGCAACGCGATTGCTAACCAGCAAACACAATCCATCAAAATGATCCTAGGTGACCGGACCTTGTTGGAACTGAGTGGTGAAGATCACAGCCGTGTCAGAGGTGCACTTGTCTCATTTTTGAAGCCAGAGTCCTTGAAGAGATATGTGGGAAAAATGGATGAAGAAGTCAGGAATCACCTTCAGATGCATTGGCAGGGGAAACAGCAACTCAAGGTATTGCCTTTGATGAAGACTCTCACGTTCAATATAATTTGCTCTCTTTTGTTTGGTCTTGAGCGTGGAAAACAGAGAGATCAATTCCTGGATTCCTTCCAAGAGATGATAGAAGGAATGTGGTCAGTCCCAATTAACGTGCCCTTCACACGTTACAATCGAAGCCTTAGAGCAAGTGCAAGAATCCAGACCATGTTGAAGGAGACTGTGCAGAAGAAGAGGACTGAACTCGAGCAAAATGCAGCATCTGCACGCCAAGACTTGATTAGTTGCTTGTTAGGCATGGTTGATGAAGACGGCAAACAAGTTATGACTGAGAAGGAAATCATTGACAACATCAAGCTTGTCATGGTTGCTGGACACGACACTTCATCTGTTCTAATCACTTTCATCATCCGACTCTTAGCCAACGAACCTGCTATTTATGCAACAGTTCTTCAAGAACAGGAAGAGATAGCAAAAGGCAAGCCCTCTGGAGAGGCGCTCACATGGGAAGACCTTTCAAAGATGAAGTACACATGGAGAGTAGCAATGGAAACTCTTAGAATGTTTCCTCCTATTTTTGGTGGCTTCAGAAAGGCTGCAACAGATATTGAATACGATGGATACCTCATACCCAAAGGATGGCAGATTTTCTGGGTTACAGCAATGACCCACATGGATAGCAGCATTTTCACAGAACCATTGAAGTTTGAACCTAGTAGATTTGAAAACCAAGCATCTGTACCCCCCTACTGCTTCATTCCATTTGGTGGGGGAACAAGAATATGTCCAGGGTATGAGTTTTCCAGGCTTGAAACTCTAGTTGCAATTCATTACCTAGTGACTCGATTCAGTTGGAAGCTATGTTCAGACAATTTCTTCAGTAGGGATCCAATGCCAGTACCATCTCAAGGGCTACTGATTCAAATTTGGCCAAGGAGACTTTCTTAA 1425 0.4337 MNLLLLGFLFFIPIFLLLRRGRNPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVQERISKYGPISKLSLFGKPTVLIYGQAANKFIFSSGGNAIANQQTQSIKMILGDRTLLELSGEDHSRVRGALVSFLKPESLKRYVGKMDEEVRNHLQMHWQGKQQLKVLPLMKTLTFNIICSLLFGLERGKQRDQFLDSFQEMIEGMWSVPINVPFTRYNRSLRASARIQTMLKETVQKKRTELEQNAASARQDLISCLLGMVDEDGKQVMTEKEIIDNIKLVMVAGHDTSSVLITFIIRLLANEPAIYATVLQEQEEIAKGKPSGEALTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKAATDIEYDGYLIPKGWQIFWVTAMTHMDSSIFTEPLKFEPSRFENQASVPPYCFIPFGGGTRICPGYEFSRLETLVAIHYLVTRFSWKLCSDNFFSRDPMPVPSQGLLIQIWPRRLS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0263 474 Gene3D Cytochrome P450 20 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PANTHER CYTOCHROME P450 26 5 470 - -
Vra6g0263 474 PANTHER OS07G0520300 PROTEIN 5 470 - -
Vra6g0263 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Vra6g0263 474 Pfam Cytochrome P450 29 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 Coils Coil 231 251 - -
Vra6g0263 474 SUPERFAMILY Cytochrome P450 25 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra6g0263 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0263 Vra-Chr6 1954953 1957358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0263 8 450 Cytochrome P450 AT5G45340 32.432 7.76e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0263 - - gmx:100790001 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0263 6 1954953 1957358 Vra6g0263 6 1954953 1957358 ECH