Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0252 ATGGACGGTGTTATTGTGAGAAGAGTTATTCCTTCAGATAACAGTTGTCTCTTCAATGCAGTTGGATATGTAATGGATCATGACAAGAAGAAAGCCCCTGAGTTGCGACAGGTTATAGCTGCAACAGTGGCAAGTGATCCACAGAAATATTGTGAAGCATTTCTTGGGAAGCCAAACGCAGAATATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGGTGCAATCGAACTTGCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATTTGTATGGTCAGGAAAGTAACTACTCTGAAAGAGTGATGCTAATTTATGATGGTCTCCACTATGATGCATTAGTGATGTCTCCCGTTGAGGATGCTCCTGAAGAGTTTGATCAGACCATATTTGCGGTTCAGCCGAACAGAAGCATTGGACCTGTGGAGAGGCTTGCTCTAAATTTTGTGAAGGACCAGCAGAGGAAACGGAGTTACACTGACACTTCCAAGTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGGCAGAAGGAGGCAATTGAGCATGCACAGGCCACTGGTCATGTTAACTTTCAAGAGTATAGATGA 627 0.4338 MDGVIVRRVIPSDNSCLFNAVGYVMDHDKKKAPELRQVIAATVASDPQKYCEAFLGKPNAEYCNWILDSEKWGGAIELAILADYYGREIAAYDIQTTRCDLYGQESNYSERVMLIYDGLHYDALVMSPVEDAPEEFDQTIFAVQPNRSIGPVERLALNFVKDQQRKRSYTDTSKFTLRCGVCQIGVVGQKEAIEHAQATGHVNFQEYR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0252 208 Pfam OTU-like cysteine protease 12 104 IPR003323 -
Vra6g0252 208 Gene3D - 1 173 - -
Vra6g0252 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Vra6g0252 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Vra6g0252 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
Vra6g0252 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0252 1 208 C2H2 Transcription Factor Family AT1G50670 79.808 2.37e-127 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0252 K13719 - gmx:100793701 405.601