Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0224 ATGGCGAATTTGCCACAATCAATCTCAATGAGTGGTGCGTCCTTTGGAGCTTCTTCTGTCTCTGCAACGAAGGATCGAAGAATGGCGTCTGTGGAACATCTCGTCCTCGAACTCAGCAATCCTGATCTCCGAGAAAACGCACTCCATGAACTCTCCAAGAAGAGAGAGTTATTTCAGGATCTTGCTCCATTACTGTGGAATTCTTTTGGTACTATGGCAGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTATTTCACCGCCAAACCTTACTCCAGCACAATCAAACCGAGTCTGCAATGCTCTTGCCCTTCTTCAGTGTGTGGCATCTCACCTTGATACAAGGATGCAATTCCTCAACGCTCATATACCTCTTTATCTGTATCCCTTCCTTAATACAACAAGTAAGTCCAGGCCATTTGAGTATTTGAGGCTTACCAGTCTAGGAGTCATTGGTGCCTTGGTAAAGGTTGATGATACAGAAGTTATAAGTTTTCTTCTTTCAACAGAGATTATTCCGCTGTGCTTGCGCAGTATGGAAATGGGCAGTGAATTATCCAAAACGGTTGCAACCTTTATAGTCCAAAAAATTCTGCTGGACGAAATTGGTTTGAAATATATTTGCACTACAGCAGAGCGCTTTTATGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTTGAGCAACCGTCATGCCGTCTTTTGAAGCATATTATTCGTTGCTATCTTCGCCTGTCAGATAACCAGAGTGCTTGCGAGGCTTTAAGAACCTGTCTCCCAGACATGTTAAGAGACGCTACATTCAGTAGTTGTCTTCGTGAGGACCCAACAGCAAGGCGGTGGCTACAGCAGTTGCTTCACAATATCGGAGTCAGTCGAGTTCCTGCACTTCAAGGTGCAGGAGGATTTGATCATATGATGGTGTCATGA 939 0.442 MANLPQSISMSGASFGASSVSATKDRRMASVEHLVLELSNPDLRENALHELSKKRELFQDLAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVGRVLGNMVATLVEQPSCRLLKHIIRCYLRLSDNQSACEALRTCLPDMLRDATFSSCLREDPTARRWLQQLLHNIGVSRVPALQGAGGFDHMMVS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0224 312 PANTHER UNCHARACTERIZED 1 310 - -
Vra6g0224 312 SUPERFAMILY ARM repeat 36 272 IPR016024 -
Vra6g0224 312 Gene3D - 23 293 IPR011989 -
Vra6g0224 312 PANTHER BNAA05G20110D PROTEIN 1 310 - -
Vra6g0224 312 Pfam Cell differentiation family, Rcd1-like 34 292 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Vra6g0224 Rcd1 2e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0224 K12606 - gmx:100801266 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0224 6 1669708 1676844 Vra6g0224 6 1669708 1676844 PCT