Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0216 ATGTCGGCGTCGGAGATTCTCCGGGAACTAGATTCACTAAAGGATGCAAAGGCAAAAATTGAGCATAAAATCTCTGCGCTTGAAGCTCAACTCAGAGAGATTAATCTCCAAAACGACGCCGCACCACCCAATGGCTCTTCTTATCCTTCTTCGTACCCCACCAACGGTTTGACGCAGGACATGATCCACAGATACAGTCGTCATCTTATGCTTCCTTCCTTTGGTGTTGAAGGGCAGGCAAATCTGTTGAAGTCATCGATTTTGGTTGTGGGAGCTGGTGGATTGGGTGCGCCTGCATTGTTATACTTTGCAGCTGCTGGTGTTGGGCGCTTGGGTATTGTTGATCATGACGTGGTTGAGCTGAATAATATGCATAGGCAGGTTATCCACACAGAAGCATATGTTGGTAAGCCAAAAGTGAAATCTGCCGCTGCTGCTTGTCTCTCGGTCAACTCCACTATTGAAGTTGTGGAACATGAAGAAGCTTTGCGGACTTCTAATGCTTTGGAAATTCTTAGCAAATATGATATAATTGTAGATGCAACAGATAATGCTCCTACCAGGTACCTCATCAGTGATTGCTGCGTGGTACTAGGAAAGCCTCTTGTCTCAGGTGCCGCGTTGGGAATGGAGGGGCAGCTTACTGTCTACAATTACAAAGGTGGTCCGTGCTATAGATGCCTCTTTCCGTTGCCACCACCTAGAACGGCATGCCAAAGTTGTGCTGAGGGTGGAGTTCTTGGAGTAGTTCCTGGTATAATTGGCAGTCTCCAGGCTCTTGAGGCTATTAAGATTGCGGCTGCTGTTGGTGAACCACTCTCAGGAAGGATGCTTCTCTTGGATGCATTGTCTGGAAGGACTCGTATTGTCAAAATTAGAGGAAGGTCTATGCATTGTGAAGCATGTGGAGAAAATGCAACATTTACAGAGCAGAAATTCCAAGAATTTGATTATGAGAAGTTCACTGAGACTCCCTTGCGTGTGCCTCCTTTGAAGTTACATCTACTTCCGAGTGAATCTAGAATCAGCAGCAAGGAATACAGTGAAATAATTCTTAAGAAGGAACCACATGTGCTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTACCGAAGTCCTTGAACATTCCACTCTCAACGTTAGAGTCTCGGCTACCTGAAATATCATCAGCTTTGAAGAAAGAGGAGGACAGTGGTCTAGTTTCTGGATCAGGTGCACAATTGTATGTAGTGTGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCACAAAATGGGTTTCACATCTGCCAAGGACATTGTTGGGGGCTTAGAGTCTTGGGCATACAACGTGGATCCCAAGTTCCCTACATATTAG 1374 0.4541 MSASEILRELDSLKDAKAKIEHKISALEAQLREINLQNDAAPPNGSSYPSSYPTNGLTQDMIHRYSRHLMLPSFGVEGQANLLKSSILVVGAGGLGAPALLYFAAAGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVKSAAAACLSVNSTIEVVEHEEALRTSNALEILSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAALGMEGQLTVYNYKGGPCYRCLFPLPPPRTACQSCAEGGVLGVVPGIIGSLQALEAIKIAAAVGEPLSGRMLLLDALSGRTRIVKIRGRSMHCEACGENATFTEQKFQEFDYEKFTETPLRVPPLKLHLLPSESRISSKEYSEIILKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLESRLPEISSALKKEEDSGLVSGSGAQLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAYNVDPKFPTY* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0216 457 Pfam ThiF family 65 300 IPR000594 -
Vra6g0216 457 Coils Coil 3 37 - -
Vra6g0216 457 CDD ThiF_MoeB_HesA_family 64 292 - -
Vra6g0216 457 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 52 424 IPR035985 GO:0008641
Vra6g0216 457 Gene3D - 58 308 - -
Vra6g0216 457 ProSiteProfiles Rhodanese domain profile. 353 455 IPR001763 -
Vra6g0216 457 Gene3D - 340 457 IPR036873 -
Vra6g0216 457 SMART rhod_4 343 452 IPR001763 -
Vra6g0216 457 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 3 443 IPR045886 -
Vra6g0216 457 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 3 443 - -
Vra6g0216 457 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 27 457 IPR028885 GO:0002143|GO:0004792|GO:0005829
Vra6g0216 457 Pfam Rhodanese-like domain 345 447 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0216 101 457 Sulfurtransferasese or Rhodanese AT5G55130 70.474 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0216 K11996 - gmx:100814736 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0216 6 1610589 1614871 Vra6g0216 6 1610589 1614871 ECH