Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0206 ATGGAGTTGTTTTCTAGAAGGATGAGTCATCTTCCCATCTTGTTCATTAGTTGTTTCTTTGGTCTTTGTAAAGCCATAGACTGTGGTGGAAATAAGGTTACACAAACCCTAATTGTTGGTAAGTATGGGCACGACGCATTCAGGACAATTCAGGCTGCCATTGATTCTGTAAGAAGTAACAATGATCAATGGGTAAAGATTCACATAAAAGCAGGCTTGTACCAAGAAAGTGTTGTTATTCCCATAAGCAAGCCATGCATTATTTTAGAAGGAGAGGGTACCCCAAAAACAATCATTAGTCACTACGACCACCAGTCCATAAACAATCATGCAACATTACTTTCTTTCCCAGACAATGTGCTTGCAAGTGGCATTACTTTCAAGAACTCATATAATGTGCCCACAACAAAATATAAATCTTATGATGTGGGAAGCAAAATCGAACCAGCAAATGCAGCAAGACTATTTGGAGATAAATATTTCTTCCATAACTGTAGTTTTGTAGGTTATCAAGACACTCTATATGATCATTCGGGACGTCATGTCTTTAAAGATTGTTACATTCAGGGTTATGCTGATTTTATATATGGTAACGGACGATCTTATTATACGAACTGTTTCATCAATGTTGTGGGGAGAATTCCAGATTTACCAGGATTTGTGACAGCTAATGGTAGAGAGTCAGCAGATGATCCTAGTGGTTTTGTATTTGAAGGAGGTTCCATTGTTGGGAATTGTAAGGTGAATTTAGGAAGAGCATGGCATCCTTATTCAAGAGTCATATTTAAAAATACATATTTTTCTGACATTGTAACTCCTCAAGGATGGGTTGCTTGGTCAGCCGCTGGAAATGAGAGCAGGACCACTTATGCTGAAATTGATTGTAAGGGACCAGGAGCTAACACTTCGAAGCGTGTTCCATGGATGAAGAAACTAAGTTCTTCAGACTTGAATAAGTTTTCTTTTGCATCTTTTATCAATAGTGATGGATGGGTTGACAACTTACATACATTATCTTAA 1020 0.3775 MELFSRRMSHLPILFISCFFGLCKAIDCGGNKVTQTLIVGKYGHDAFRTIQAAIDSVRSNNDQWVKIHIKAGLYQESVVIPISKPCIILEGEGTPKTIISHYDHQSINNHATLLSFPDNVLASGITFKNSYNVPTTKYKSYDVGSKIEPANAARLFGDKYFFHNCSFVGYQDTLYDHSGRHVFKDCYIQGYADFIYGNGRSYYTNCFINVVGRIPDLPGFVTANGRESADDPSGFVFEGGSIVGNCKVNLGRAWHPYSRVIFKNTYFSDIVTPQGWVAWSAAGNESRTTYAEIDCKGPGANTSKRVPWMKKLSSSDLNKFSFASFINSDGWVDNLHTLS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0206 339 Gene3D - 30 338 IPR012334 -
Vra6g0206 339 PANTHER PECTINESTERASE 2 337 - -
Vra6g0206 339 SUPERFAMILY Pectin lyase-like 35 335 IPR011050 -
Vra6g0206 339 Pfam Pectinesterase 37 328 IPR000070 GO:0030599|GO:0042545
Vra6g0206 339 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vra6g0206 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0206 Vra-Chr6 1537342 1539724 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0206 13 285 Carbohydrate Esterase AT2G19150 42.754 1.49e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0206 - - var:108336510 469.159