Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0205 ATGGAGTTGTTTTCTAGATGGATGAGTCTTCTTCCCATATTTTTCATTAGTTGTTTCTTTGGTCTTGGTAGAGCCACAGACTGTGGTGGAAATAATGTTGCACAAACCCTAATTGTTGGTAAATATGGGCAAGCATTCAGAACAATTCAAGCTGCCATTGATTATGTCAAAAGTAACAATGATCAATGGGTAAAGATTCACATAAAAGCAGGCTTCTACATGGAAAGTGTTGTTATTCCCGTTGACAAGCCATGCATTATTTTAGAAGGAGAAGGTATACGAACAATCGTTAGTCACTGGGACCATCAGTCCATAAACAATAATGCTACATTCACTTCTTTCTCACCAAATTTGATTGCAAGTGACATTACTTTCAAGAACTCATATAATGTGGCCACTGATAAATATTTGGGAAATAAAATCGAACCAGCAAATGCTGCAAGACTGTCTGGAGATAAATATTTCTTCAGTAGGTGTAGGTTTATTGGTTATCAAGACACTTTATATGATCTTATGGGACGTCATGTCTTTAAAGATTGTTACATTCAGGGTGAAGTCGACTTTATATATGGTTCCGGACAATCCTATTATCAGAACTGCTACATCAATGCTATGGGGAGATTTCCAAATTTACCAGGTTTTGTGACAGCTCAGGGAAGAAATTCAGCAGATGATCCTAGTGGTTTTGTATTTGAAGGAGGTTCCATTGTTGGTAATGTTAAAGTTAATTTAGGAAGAGCATGGAAACCCTATGCAAGAGTCATATTTCATAATACATATTTTTCTGACATTGTAACTCCTCAAGGATGGGTTTCTTGGTCAGCCGCTGGAAATGAGAGCAGGACCACTTATGCTGAAATTGATTGTAAGGGACCAGGAGCTGACACTTCGAAACGTGTTGCATGGATGAAGAAACTAAGTTCTTCAGACTTAAATAAGTTTTCTTTTGCATCTTTTATCAATAGTGATGGATGGGTTCACAACTTACCAACAATATCTTAG 1002 0.3713 MELFSRWMSLLPIFFISCFFGLGRATDCGGNNVAQTLIVGKYGQAFRTIQAAIDYVKSNNDQWVKIHIKAGFYMESVVIPVDKPCIILEGEGIRTIVSHWDHQSINNNATFTSFSPNLIASDITFKNSYNVATDKYLGNKIEPANAARLSGDKYFFSRCRFIGYQDTLYDLMGRHVFKDCYIQGEVDFIYGSGQSYYQNCYINAMGRFPNLPGFVTAQGRNSADDPSGFVFEGGSIVGNVKVNLGRAWKPYARVIFHNTYFSDIVTPQGWVSWSAAGNESRTTYAEIDCKGPGADTSKRVAWMKKLSSSDLNKFSFASFINSDGWVHNLPTIS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0205 333 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Vra6g0205 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 332 - -
Vra6g0205 333 Pfam Pectinesterase 38 322 IPR000070 GO:0030599|GO:0042545
Vra6g0205 333 PANTHER PECTINESTERASE 5 332 - -
Vra6g0205 333 SUPERFAMILY Pectin lyase-like 33 328 IPR011050 -
Vra6g0205 333 Gene3D - 30 331 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0205 Vra-Chr6 1530899 1532646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0205 27 279 Carbohydrate Esterase AT2G19150 44.186 2.71e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0205 - - var:108336510 462.225