Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0182 ATGGGGTTCTCGGTTACCACGCTAGTTTTCGCAGTGATTGGAATTGTTGCGTCCCTTTGTACCAGAATTTGTTTCAACAGAGGACCTTCCTCTAATCTATTTCACCTAACATTGGTTCTTACTGCAACAATATGCTGCTGGATGATGTGGGCGATCGTATATCTAGCACAGATGAAACCCCTCATTGTACCTATCCTGAGTGAGGGTGAATAG 213 0.4413 MGFSVTTLVFAVIGIVASLCTRICFNRGPSSNLFHLTLVLTATICCWMMWAIVYLAQMKPLIVPILSEGE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0182 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 70 IPR008389 GO:0033179|GO:0046961|GO:1902600
Vra6g0182 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Vra6g0182 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0182 Vra-Chr6 1346010 1348167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0182 1 70 Primary Pumps ATPases(2) AT4G26710 78.571 2.13e-39 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0182 K02153 - gmx:100798558 142.124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0182 6 1346010 1348167 Vra6g0182 6 1346010 1348167 ECH