Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0161 ATGCAGGCCTTATGGATCTCCTTGAAGGATAATGTCAAATGTGGAAACAAGATCAACGATGTAATCAAGCAGCAAACGAAATGCAGCAAGGGAAGTGGCTGTGTTTCAGAATGGGAGAAAACGAATGGCTATAATAGATCTCTAATGCTAACCCCAACTAGCCAAGTAGTTTCAAGACCAAGCAATACACTGGGAAGGCTTCATGAACTGGGTGTTGGAGACCCATCAAGAAAAATTGTGGAAATGATCTTTCAAAAAGCTTGGCTCAACACATCAAAGCCACTGAAAAAGGTTAGAACAGTCCTCAGGGTGAGCTACTCAGAAGAAGTCCTTGAAAGGTTTGAAAAATATAGAGAAAATGTGAAGAAGGTGGCCTCTGAGCAATATCCAAGGCATCCAAGGAGCACAGTTGATGGGAATGAGCTGTTGCGGTTCTATGGTACTACAGTGAGATGTTTCCATGGGAAATCTACTAAGAGAGTTCATGATCTTTGTAAAGATCCATCTTGTTATCTATGCCAAATAATTCAATTTAATTTCAAGACACAATACGCCCACTTGAATACGAGTGACAAAGAGTTGAGTAACGGAGCAACTGCCACTGCCAGGGTACATAGCGTGAAAAAAGCTGCAATAATTTGCAGGATAATTGCTGGAATTCCAGAAAATGAAGTTGATGGTGAATATGAAGGACCTGGCTCAACTGGGTTAGGAGAAATGCAGTTTAGCTTAGAAAAATTTGTAGTAAAAAATCCCAGTTCTATTCTTCCTTGTTTTGTAATAATTTTCAGCTAA 795 0.3987 MQALWISLKDNVKCGNKINDVIKQQTKCSKGSGCVSEWEKTNGYNRSLMLTPTSQVVSRPSNTLGRLHELGVGDPSRKIVEMIFQKAWLNTSKPLKKVRTVLRVSYSEEVLERFEKYRENVKKVASEQYPRHPRSTVDGNELLRFYGTTVRCFHGKSTKRVHDLCKDPSCYLCQIIQFNFKTQYAHLNTSDKELSNGATATARVHSVKKAAIICRIIAGIPENEVDGEYEGPGSTGLGEMQFSLEKFVVKNPSSILPCFVIIFS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0161 264 Gene3D - 65 264 - -
Vra6g0161 264 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 264 - -
Vra6g0161 264 PANTHER NUCLEIC ACID-BINDING PROTEIN 2 264 - -
Vra6g0161 264 SUPERFAMILY ADP-ribosylation 67 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0161 Vra-Chr6 1174236 1175419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0161 69 262 C2H2 Transcription Factor Family AT5G54630 37.850 7.12e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0161 - - gsj:114384928 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0161 6 1174236 1175419 Vra6g0161 6 1174236 1175419 ECH