Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0118 ATGGAGAATGAAAGAGAAGATGAGATTGAGGATATGTCAACGTCACCCCCGTCTCTGGGCTCCCTGCAATTTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCTAATATGTACACTGATATTGACATAAAAATTGAGGATTCCAATTTCAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAGCTAGCCAAGCGGCTTCCACTAATCCTGTGAAGTCAGTGATGTCAAAAGTTGCCATACAACACAACCTGGGAGAAGATAAATACAAGAAAATTTTGAAGGGTATGACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACCTTGTTGAGAGTTGTAGGGGGAAGATTAGTTGAAAACGTAAAGGGAAAGATAACTTACAATGACGTTCGATTTAATGCAGCTGTCAAGAGAAGGATTGGCTTTGTTACACAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAGGAAACATTGATCTTCTCTGCATTCTTAAGGTTACCAGGCAATATGAGCGAGCAACAAAAATATGCAAGAGTGGAGACCACTATCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAAGCATATCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTTCTACTTGATGAACCAACTTCAGGCCTTGATTCCACAGCAGCAAATAGACTCCTTCTCACTCTTCAGGGACTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTTATATCAGAAGGATACCCCATTTACTATGGGAAGGCCAAGGACACAATGCAGTACTTTTCATCGTTGAGTTTCACCCCGGAAATACCAATGAATCCTGCAGAATTCATGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCTTTCCTCAAGATACTTTCAAAGATCAAGAATCTGCCGACCGCTCAAAATCTGTTATTAAATATCTACAACTCAAGTATAAGGAAACACTGGAAGCAAAAGAAAAAGATGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAGCTAGCCATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTTGGACCAATTCTTCATTCTTTACAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAACTAAGATTAGTTCAAGCACTTGGCATTGCTCTTTTGTTGGGGCTACTTTGGTGGAAATCCTCAACCAATACAGAGGCTCAAGTTAGAGATCAGGTTGGATTAATGTTCTATATCTGTATATTCTGGACATCTTCATGCATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAAGTCTATTTGGTGAAAGAAAGGAAAGCAGATATGTATAGACTGAGTGTATACTACGTAAGCAGCACTCTGTGTGATATGGTGGCGCATGTCTTTTACCCTACTTTCTTCATGCTTATCTTGTACTTCATGGCTGGGTTTAAGAGGACCGTTGCTTGCTTCTTCCTGACTTTGTTCGCGGTGCTGCTAATAGCTATAACAAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATAATTGCTTCTTTGATACTAATGTTGTTCCTTCTCACCGGTGGCTACTATGTCCAGCACGTACCGAAGGTGATGCAGTGGTTGAAGTATTTGTCGTTCGTGTACTATGGCTTCAGACTTCTTCTGAAAGTGCAGTATTCAGGAGAACAACTATATGAATGTGAAAGTGAGAGAGGATGCAGACCACTGCAGAGTTCACCATCATTTGACACAGTAAACTTGAATGGAGGCTTAACTGAAGCATGGATTATGGTAGCCATGGCTCTGTGCTTCCGTGTCTTGGCCTACTTCTGTCTCCGCAGACGAATTGAAGTTCCAAATTAG 2061 0.4207 MENEREDEIEDMSTSPPSLGSLQFAGSNGFGHSMEFMSQAYLPNMYTDIDIKIEDSNFNQDPPLPIYLKFEDVEYKVRASQAASTNPVKSVMSKVAIQHNLGEDKYKKILKGMTGSIGPGEILALMGPSGSGKTTLLRVVGGRLVENVKGKITYNDVRFNAAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPGNMSEQQKYARVETTIKELGLERCRHTKIGGGYLKSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTAANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDTMQYFSSLSFTPEIPMNPAEFMLDLATGQVNNISFPQDTFKDQESADRSKSVIKYLQLKYKETLEAKEKDENHGAANTPEHLQLAIQVKKDWTVSWLDQFFILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYVSSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGIIASLILMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGEQLYECESERGCRPLQSSPSFDTVNLNGGLTEAWIMVAMALCFRVLAYFCLRRRIEVPN* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0118 686 MobiDBLite consensus disorder prediction 1 24 - -
Vra6g0118 686 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Vra6g0118 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 682 - -
Vra6g0118 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 332 IPR003439 GO:0005524
Vra6g0118 686 Gene3D - 93 327 IPR027417 -
Vra6g0118 686 SMART AAA_5 119 310 IPR003593 -
Vra6g0118 686 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Vra6g0118 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 682 - -
Vra6g0118 686 Pfam ABC-2 type transporter 289 352 IPR043926 GO:0140359
Vra6g0118 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0118 Vra-Chr6 837022 841202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0118 108 293 Calmodulin-binding Proteins AT2G36910 29.319 9.45e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0118 K05681 - gmx:100815259 1224.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0118 6 837022 841202 Vra6g0118 6 837022 841202 ECH