Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0093 ATGGACATTCTGAATGGTTTTTTGTCTGATGTTTTAAAAGAGGTGGTGTGTGGAGCTGTTAATCAATTACAATACTCTTTTTGCTTTAATAGTTTTGTTAAAGAGCTTGAAAAAGAAAAAGAGAATTTGATAGAAACAAAAATAAGTGTAAAAGATCGTGTCATACATGCTCAAAGACAAACCTTAAAGACTGCTGAAGTTATTGATAAATGGTTGGAGAATGCAAACACTAGTTCAGAATCTGTGAATCGTTTGCTGAGAGAGACAAACACCAAAAAGAGTTGTTTTTTTGAATTTTGTCCAAATTGGATTTGGCGATACCGTTTAGGAAAAAAGTTGGCAATTAAAAAAGCAGACCTTCAAAAGATCATTCAAGAAGGTAGACAATATATACAACTTGAACGCATTGCCTCAATTCCTTCAAACACTTTTGATATTCTCACAGAAAAAAGTATTAACTTTGATAGTAGAAAAAATGCTTTTGATCAACTTGTAAAAGCATTAAAAGATGATGGGATTGCCATGATTGGATTGTACGGGATGGGGGGTTGTGGTAAAACCACATTAGCAATGGAAGTTAAAAAGATAGCAGAAGCTGAGCATCTTTTTGACAAAGTTGTTTTTGTTCCTGTGTCTAGTACAGTAGAAGTTCCAAGGATTCAAGAAAAACTTGCTAGTTCATTGCAGTATCAATTTCCAGAAAACCAAGAAATGGAAAGAGCCCAACGCTTGTGCATGAGATTAACCCAGGAAAATAAAATTCTTATGATTCTAGATGATGTGTGGGAAAAACTTGATTTTGGTAGCATAGGGATTCCCTCCTCTGAATACCGTAAAGGCTGCAAGATTCTCATTACCACTAGATTGGAAGAAGTTTGTAATTCAATGGATTGTCAAAAAAATATTTATCTACCAATCTTAACTGATGAAGAATCGTGGACTCTCTTCCAAAACAAAGCACTTATTTCTAAAGACACTCCTGAAAACATCAAGCATTTGGCAAAATCAATATCAAATGAATGTAAAGGATTGCCTGTTGCCATTGTAGCTGTTGCTAGTAGCTTGAAGGGAAAAAAAGAGGTGATATGGCATTCTGCGTTGAATAAATTGAGAAGTTCTAAGCCAATCAATATTAGTAGGGGTTTGCAAGATCCCTATATGTGTTTAAAGTTGAGCTTCGATAATCTAGATACTGAAGAAGCTAAATCACTTTTTCTGTTGTGTTCTGTATTCCCTGAAGATTATGAGATTTCAGTCGAATGTTTAATAAGATGTGCAATTGGTTTAGGTGTGACTGGAGAAGTTCACTCATATGAAGAGGCAAGGACTGAAGTGATTGCCGCCAAAATCAAGCTTGTAAGTTCTTGTTTGATGTTGGAGGTGAATGATGAATGTGTCAAAATGCATGACTTGGTTCGTGATGTAGCCCATTGGATTGCAAAGAATGAAAATAAGATGATCAAGTGTGAAGTGGAAAAGGATGTAAGTTTGGAGGAAGGTCCAATAAGATATCTATGGTGTGTGAAATTTCCAGATAGTATGGATTGTTCCAATCTTGAGTTTTTAAGTATACAAACAAACTTGGAAGTATCCGATGGAATTTTTGAAAGAATGGGAAAACTTAGAGTTTTGATTATTACCAATAAAAGCATCCCTACGCAATTGTTAACAATGTCTTTCAAATCATTAATCAATGTCCGTTGTCTAGTCCTTCAATATTGGAAATTGAGAGACATCTCATTTGTAAGAGATATGAAGAAACTTCAAAGTCTTTCGTTTCATAATTGTTCATGGCCTTCATTCCTTGACTTGCAAACTGATGTTGCAGTTACAACACTTACAAACTTGAAGTTGTTAGAGTTTATAAGTTGTGACATTGAAAGCAATATTTTTGAAGAGATCAAAAGAATCCCATTTCTAGAAGAATTCTATATTTATAAAGACAACAATTACTGGAATGATCCAAAGGAAGAAAGTGTTAAATTCTCTAACTCCTTTAGTGTCTCCCAAATGCTACAAAGGTATGGAATTGTATTAGGATACTCTTCTTTTCGTAATAGTTATAGATTTCAAGAGTTTTGCTCTTGTGAGAGAACTTTAGTAATGAATTATTTTGACATATCAAATGAGGTTATTAAAGGTTTGGCAAAAAAAGCAAAAGAGCTATCTGTAGGAAATATTGAGGGAGGTGCAAAAAATATGATGCCAGATATATTTAAAATTGAAGAAGGTATGAATGAGTTGAAAGAACTGAAGATGCATAATTGTGAAGAAATAGAGTGTTTGATTGACAATAGCAGTAATTTGAGTAAGATGGGAAATATTTTCTCCAAGTTACGTTATATGGAGATCTTCAATATAAATCATCTAAAAACTTTATGGCATGGTTGTCCACGTGTCAATGGATGTTTTGAAAAAATGGAGGAGCTATATATAAGAGATTGCCCACAATTAATATCTCTCTTCACATATGTCATTGCTCCAACAAATGACAAAACAAAGAAAAGTGAAGATCAATTCACACATGGGCATTTGATGCCATCCAAAATTTTTCAGAATCTTCAAAAAATGGAGTTGTTTAACTGTGGAGAATTAAGACATGTATTCTCAGCAAGTATTACAGGAAGCCTAACTCAATTGAAAATTCTTACTATTGAAGAGTGCAATATGTTAGAACAAATATTTGAAGATGCTCTTCCTCCAACACACCATGAAGAAACAAATGAAATTGTAGAGGAAGATGTGCAGAGTAGCTCAGGTACCTTTTCCATATTACATATCTCATAA 2787 0.3376 MDILNGFLSDVLKEVVCGAVNQLQYSFCFNSFVKELEKEKENLIETKISVKDRVIHAQRQTLKTAEVIDKWLENANTSSESVNRLLRETNTKKSCFFEFCPNWIWRYRLGKKLAIKKADLQKIIQEGRQYIQLERIASIPSNTFDILTEKSINFDSRKNAFDQLVKALKDDGIAMIGLYGMGGCGKTTLAMEVKKIAEAEHLFDKVVFVPVSSTVEVPRIQEKLASSLQYQFPENQEMERAQRLCMRLTQENKILMILDDVWEKLDFGSIGIPSSEYRKGCKILITTRLEEVCNSMDCQKNIYLPILTDEESWTLFQNKALISKDTPENIKHLAKSISNECKGLPVAIVAVASSLKGKKEVIWHSALNKLRSSKPINISRGLQDPYMCLKLSFDNLDTEEAKSLFLLCSVFPEDYEISVECLIRCAIGLGVTGEVHSYEEARTEVIAAKIKLVSSCLMLEVNDECVKMHDLVRDVAHWIAKNENKMIKCEVEKDVSLEEGPIRYLWCVKFPDSMDCSNLEFLSIQTNLEVSDGIFERMGKLRVLIITNKSIPTQLLTMSFKSLINVRCLVLQYWKLRDISFVRDMKKLQSLSFHNCSWPSFLDLQTDVAVTTLTNLKLLEFISCDIESNIFEEIKRIPFLEEFYIYKDNNYWNDPKEESVKFSNSFSVSQMLQRYGIVLGYSSFRNSYRFQEFCSCERTLVMNYFDISNEVIKGLAKKAKELSVGNIEGGAKNMMPDIFKIEEGMNELKELKMHNCEEIECLIDNSSNLSKMGNIFSKLRYMEIFNINHLKTLWHGCPRVNGCFEKMEELYIRDCPQLISLFTYVIAPTNDKTKKSEDQFTHGHLMPSKIFQNLQKMELFNCGELRHVFSASITGSLTQLKILTIEECNMLEQIFEDALPPTHHEETNEIVEEDVQSSSGTFSILHIS* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0093 928 Gene3D Ribonuclease Inhibitor 501 904 IPR032675 -
Vra6g0093 928 PANTHER - 23 898 - -
Vra6g0093 928 Gene3D - 141 303 IPR027417 -
Vra6g0093 928 Coils Coil 33 53 - -
Vra6g0093 928 Pfam NB-ARC domain 159 395 IPR002182 GO:0043531
Vra6g0093 928 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 23 898 - -
Vra6g0093 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 408 IPR027417 -
Vra6g0093 928 Gene3D - 306 392 IPR042197 -
Vra6g0093 928 Gene3D - 393 478 IPR036388 -
Vra6g0093 928 PRINTS Disease resistance protein signature 175 190 - -
Vra6g0093 928 PRINTS Disease resistance protein signature 248 262 - -
Vra6g0093 928 PRINTS Disease resistance protein signature 341 355 - -
Vra6g0093 928 PRINTS Disease resistance protein signature 875 891 - -
Vra6g0093 928 SUPERFAMILY L domain-like 467 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0093 Vra-Chr6 655814 658631 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0093 173 488 WRKY Transcription Factor Family AT5G45050 23.457 2.81e-06 49.7