Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0091 ATGTCTTCTACTACTTCTTCTTCTTCCTCGTCATCATCGTCATCATCAACTTCAGCCCCATATGATGTTGTTGCTGCTCCTGATATCCCTGGCCCTAGTACTAGGAGACCCGCTCAATTTGAAGGCCCTTCCTCCTCTCGTCAACGTCCTATGAATGAGGTATTGCCTGCGCCTTTTCTTGAAGCTTTGGCCAACCAGCTCGCCATTGATGTTGCCAACTACAATGGACGTCTTGCTGCTTCTGAGGCCCTTGCACATTTTTTTCGGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATATGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGACGTTCCGAGTGAGGGACACGTGGCACGCCGAGTACATCAACTGGCATCGGACGGCTACGAACTTCGAGACTGGAAGGCTGTCGTTTATGACTCCGCGCTTTGATCCTTCGGAGCATCGCCGGGGCTTGATCTGCCGCTGCCTCGCCCTTTCCGACACCCGCCTCGCGTGCGGCTTCGTAGACGGCACCGTGCGGGTCTTCGACCTCGAAACCTACGACCACGTCAGCACCTACCTGTCCGACCACGGCCACCTCTTCGGGCCCTACTCGCGCTCTGTCTCGGGAATCATTATCACCGACTCCGACATCACCTTCGCCAGGCTGGACGGGGACATCTACGTGGACGCTATCAACGTGCATGGGCAGAGCCAAGCGCGGCGGGCCGTGTCGGGATTCGTGATGAACAGCGGGGTCTTGGTCGCGTTCGCGGGAACGCGGCGGCGGTGGGTGGGCCTGTTCGCGGGGATAGCGGAAGGTGCGTTCCAGGTTTGGAACGCGGAGAGCGGGGAGCGCCTGTTCCTTGGGGGGACGTTAACTGATCCGGAAACGGTTATGGGGTGGCACATGCTGACGGAGTTGGTTGACCCGGTGGGGCGGGTGCGCGTGACGGAGGATGAGTTCGTGGTGGCATGCACTAGTTTGAGGCTGATCTGTTTCAACGCATGGAACCCGGAGGTTCTGCTGCGGGACGAGATGTCGGCGTCGGGGTTCGTGGTGAGTTCGATGGATGTGAGTTCGGAGGCGTTTGTGGTGGTGGAGCGTGATGGGGTGGGAACGGTTTGGCGCGTGAGGACGATGGAGTTGATGAGCCGGTTTGAGTTGAGGAGTTCGTGGGTTCGTGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGGTAACCTATTCTCCTAACCCTAGGCCATTCTTGAGGGTTTGGAACATTGAGCAAGAGGAAGGACGACTGTGTGTGAGAGTGTTCCTGCGAGCAGGAGAGGTGAATAGCATGGTTGGTGATGACAGACACGTGGCTATCTCTTCCAACAACATTAATCTATTGGATTTTGGTGTACAGAATCCTTAG 1401 0.5739 MSSTTSSSSSSSSSSSTSAPYDVVAAPDIPGPSTRRPAQFEGPSSSRQRPMNEVLPAPFLEALANQLAIDVANYNGRLAASEALAHFFRVCSTWREVSRSDMLWEHLTRRIWRRTFRVRDTWHAEYINWHRTATNFETGRLSFMTPRFDPSEHRRGLICRCLALSDTRLACGFVDGTVRVFDLETYDHVSTYLSDHGHLFGPYSRSVSGIIITDSDITFARLDGDIYVDAINVHGQSQARRAVSGFVMNSGVLVAFAGTRRRWVGLFAGIAEGAFQVWNAESGERLFLGGTLTDPETVMGWHMLTELVDPVGRVRVTEDEFVVACTSLRLICFNAWNPEVLLRDEMSASGFVVSSMDVSSEAFVVVERDGVGTVWRVRTMELMSRFELRSSWVRGLWGCMNLGYVVTYSPNPRPFLRVWNIEQEEGRLCVRVFLRAGEVNSMVGDDRHVAISSNNINLLDFGVQNP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0091 466 MobiDBLite consensus disorder prediction 1 51 - -
Vra6g0091 466 Gene3D - 48 136 - -
Vra6g0091 466 PANTHER WD40 REPEAT PROTEIN 12, 37 7 464 - -
Vra6g0091 466 Gene3D - 137 463 IPR015943 GO:0005515
Vra6g0091 466 SUPERFAMILY WD40 repeat-like 159 454 IPR036322 GO:0005515
Vra6g0091 466 MobiDBLite consensus disorder prediction 1 21 - -
Vra6g0091 466 SUPERFAMILY F-box domain 84 131 IPR036047 GO:0005515
Vra6g0091 466 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 7 464 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Vra6g0091 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0091 - - gmx:100807240 635.18