Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0087 ATGGACATTCTATATGGATTTTTATCTGGAGTTTTAAAAGACGTAGCATGTGGGGCTACTAATCAATTACAATACTCCTTTTGCTTTAATAGTTTTGTTAAAGAGCTCGAAAAAGAAGAAGACAACTTGATCGAAATGATAAGGAGTGTAGAAGATCGTGTCATACATGCACGAAGACAAACCTTAAAGACTACTGAAGTTATTGATAAATGGTTGGAGAATGCAAACATTGATTCAGAATATGTGAATCGTTTGCTCAGAGAGACAAATGCCAAAAAGAGTTGTTTTTTTGAATTCTGTCCAAATTGGATTTGGCGATACCGTTTAGGAAAAAAGTTGGCAATTAAAAAAGCAGACCTTCAAAAGATCATTCAAGACGGTAGACAATATATACAACTTCAACGCATTGCATCAATTCCTTCTAACACTTTTGATATTCTCACAGAAAAATCTATGAATTTTGATAGTAGAAAATTTGCTTTTGATCAACTAATGGAAGCTGTGAAAGATGATGGAGTTGCCATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACCACATTAGCAATGGAAGTTAAAAAGATAGCAGAAGTTGAGCATCTTTTTGACAGAGTTATTTTCGTGCCTGTGTCTAGTACAGTAGAAGTTCCAAGGATTCAAGAAAAAATTGCAAGTTCATTGCATTATACATTTCCAGAAAATCAAGAAATGGAAAGATCCCAACGCTTGTGCATGAGACTAACGCAGGAAAAAAAAATTCTTATGATTCTAGATGATGTGTGGGAAAAACTTGACTTTGGTCGCATAGGGATTTCCTCCTCTGAATACCATAAAGGCTGCAAGATTCTCATTACCACTAGATCCGAAGATGTTTGTATTTTAATGGATTGTCAAAAAAAGATTTATCTACCAATCTTAACTGATGAAGAAGCGTGGACTCTTTTCCAAAACAAAGCACTTATGTCTAAAGACACTCCTGAAAACATGCAGCATTTGGCAATATCAATTTCAAAAGAATGTAAAGGATTGCCTGTTGCCATTGTAGCCGTTGCTAGTAGTTTGAAGGGAAAAAAAGAGGCGATATGGCATTCTGCGTTGAATAAATTGAGAAGTTCTAAGCCGATCAATATTAGTAGGGGTTTGCAAGATCCCTATATGTGTTTAAAGTTGAGCTACGATAATCTAGATACTGATGAAGCTAAATCACTTTTCTTGCTATGTTCTGTATTTCCCGAAGATTATGAGATTTCAGTGGAATGTTTAATAAGATGTGCAATAGGGTTAGGTGTGGCTGGAGAAGTTGACATATATGAAGAGGCAAGGACTGAAGTGACTGCAGCCAAAATTAAGCTTGTAAGTTCTTGTTTAATGTTGGAGGCGGGTGATGAACGTGTCAAAATGCATGATTTGGTTCGTGATGTAGCCCATTGGATAGCAAAGAATGAAAATAAGATCATCAAGTGTGAATTGGAAAAGGATGTAAGTTTGGAGGAAGGTTCAATAAGATATCTATGGTGTGTGAAATTTCCAGATGGTATGGATTGTTCCAATCTTGAGTTTTTAAGTATACAAACAAAATTGGAAGTATCCGATGGAATTTTTGAAAGAATGGGAAAACTTAGAGTTTTGATTATTACCAATAAAAATGGCTATAGGTTGCAATTGTCAACAACGTCTTTCAAATCATTAACAAATCTTCGTTGTTTAGTCCTTCAATACTTTGCATTGAGAGACATTTCATTTGTGAGAGATTTGAAGAAACTGCAAAGTCTTTCGTTTCATCGTTGTTCATGCTCTTCATTCCTTGACTTGCAAACTGATGTTGCAGTTACAACACTTACAAACTTGAAGTTGTTAGAGTTTATAAGTTGTGACATTGAAAGCAATATTTTTGAAGAGATCAAAAGAATCCCATTTCTAGAAGAATTATACATTCTTGAAAATGGTCAGAGATACAACAACGAAGAAAACGTTAAATTCTTTAACTCGTTTAGTGTCCCTCATACACTACAAAGGTTTGGAATTATATTAGGATATGATATATGGCAATTAGAGTTTTGCTCTTATGAGAGAACTTTAAGAATTAATTATTTTGACATATCAAATGAGGTTATTAAGGGTTTGGCCGGAAAAGCAAGAGAGCTATATGTAGGAAATATTGAGGGAGGTGCAAAAAATATGATGCCTGATATATTTGAAATTGAAGAAGGTATGAATGAGTTGAAAGAACTGAGGATACGTGATTGTGAAGAAATAGTGTGTTTGGTTGACACTAGCAATCATTTGAGTAAGATGGGAAATATTTTCTCCAAGTTACGTTTGATGAGGATCATGAGCATGAATAATCTAAAAACTTTATGGCATGGTTGTCTACCTGCCAATGGGTGTTTTGAGAAATTAGAGAACATGTATATAGAAGATTGCCATCAATTAACATGTCTCTTCACGAATATCATTGTTCCAACGAATGACAAAACAAAGAAAAGTGAAGATCAATTCAGAAATGGGCATTCGATGCAATCCAAAATTTTCCAGAATCTTCAAGAAGTGAGGATATATCATTGTAGAGAATTAAAACATGTATTCTCAACCAGTATTTCAGGAGACCTATCTCAATTGAAAATGCTTGAGATTAAATATTGCCATATGTTAGAACAAATAATTGAGGAAGTTCTTCCACCACCAGCACACCATGAAGAAACAAATGAAATTGTAGAGGAAGATGTGCAGAGTAGCTCAGGATCGTTTTTTCTGTCTAGCCTTGCACTTCTTAAGATATCTTCATGTTCAATGTTGGAGTCATTGTTTACAATATCTGTAGCTAAAACCTTGACTTCATTGGAAAAATTGAAAATATCTAACTGTCATGGTTTGAAGCATATAGTACCTCCTGCAAGAGTGAAAAGAAATAAAAACATGGTTGAAGATGAACATGAATTTGAAAATGATCTTTCAATGTTCTCAAATTTGAAAAGTATATTTATTCGGGAGTGTGTCTCGTTGCAAGATATATTCGCAACACCTGTCAACGAGTGTTTTGAAAAATTAGAGAAGGTATATATAGACAATTGTCCACAATTAACATATCTCTTCACGTATGTTGCTCAAGGATTGACGGAGTTGAAAATATTACACATATACAATTGTGACATATTGAAGCATATAATAACATATGATGACAAAACAAAAAAAAGTGAAGATCAATTTACAAGTAGACATTCCGTGCAATCTAGAATTTTCCAAAATCTTGAAGAAGTGATGTTAGATGAATGCGGAGAATTAAAACATGTATTCTCAGCCAATATCATAGGAGGCCTACCTCAATTGAAAAAGCTTGAGATTGAAAATTGCAATATGCTACAACAAATAATTGTTGAGGAAGATGAGTGTCAGCATTTTGAATCTAACCAAGTCAAAGTTTCTCCTGAAAGCATTTCAATTCCATCAGTATCTACTGTGAACAATATCTCAGGATCGTTTTCTCTGTCTAGCCTTGCACTTCTTAGTATAAAGTATTGTCTAATGTTGGACTCATTATTTACTACATCTGTAGCTAAGACCTTAACTTCATTGGAAGAATTGGATATATCTAACTGTGATGGTTTGAAGCATATAGTAAGTCCTGAAAGAGTGAAAAGAAATAAAAACATGGTTGAAGATGAGCATGAGTTTGAAAGTAATCTTTCAATGTTCTCAAGTTTGAAATGGGTAAAAATTTCGAGATGTGACTCATTGCAAGATATATTCATAATGCCTTTTGTTGGGGGCACAGTGAATATTCAGAACCATTTTTCCACTCAGCAAACTCTACGCATGAGCAATGCCAACAATGGAGATTGGATGATGGGACAACAAGTCAGTTTAAAGTTAGAATTTTTAAAGTTGAGTTATCTACATGAAATGACTCATATTTGGGTGGCTACCAACAACTCATTTACCCTTCAACATCTCAACTCATTAATAATAGAAGAATGTGAAAAATTGGAAGTAATATTTCCTCAGTCTATGTTGAGATCCCTACCAGAGTTAAATTATCTACAAGTAAGTGAATGCAAGGAATTAAGACAGATTATTGAAGAGGATTTGGAGGATAAAAGCCTTTTTGCACAGCCATGCTTCCCGAAACTAGACTCATTGGTTATTGAACGATGCCATAAGTTGAAATGTTTCACCTCTGTAATTGCATCCAATGCTCTTTCCAACTTGAGGATTCTAATCATAAAGGAAGCCACTGAACTACAAGAGTTTATTGCATGCGAATACGATGAGACAGTAAAGACCAAAGTTGAACTTCCACAACTTAAACTTATAATATTTATGGATCTTTCAAATTTTCAGCAAGAGAGTATATTTTCAAATGTGAAGCATCGCATTATCCGCAATTGTCCAAAACTCTCTTTGACTTCAACAATTACTCCTCAGGAGCTCCAACAAAATTATCCTTTGGAAGGTTTGGGAATGTCTGAAACAATTCGTTTGGAGATTTCGTCACTGATGTATGAAATAAAGAAATTAGATGAAGTTTCTACAAACAACAATTCTACTGAGTTGCCTTCTTCACAGGAAGTGGCTCCTGCAACGACTGCTTCATACTTCACAGACCAACAAAGTCCACTTGGACAAACTCAAAGTACCATCAAAATGTCTCAGCAGGATTGGGATCCTACGCCAAAAAACACTTCTCCCCTCCAAATGAACCGCGAAGATCAATCTACATCTCAAATTAAACCATTTTCTTCACAAGTCAATGATAACAATCAATCTATGTTGGAGAGCAGAGTTGAAATGGTAGGTCAACATAACAAAATTGAAACCAAAACACAAGCACCGGAAATAGAAGAGTTCCAAAAAATAGACAGAAAAAATGAAATGGCATCAGACCCACAAGCTATGGATCAAAACTTTCCAGTCATTTCTTCTCCAAACATGACTCAGCGTACTGATGAAATAGAGACAGACAACTTGGGAAAAACTACGACATCAGATAAACCTGCAATACCAACTTTTGTTTCAGAGAATATTGAGGAAATAGGAAGAGAAAGAAGGAGAGGTGGGCCTGCAATAGAGGGAGTTACAATTAAAACCTTGCCAATTGGTGGAGATAACATTAGCTTGGTTAGTGGTGTTACAATTCACAACTCAAGTGGTGCAAATATACTTTCACAAGATTCCCAGATTGTTAAACAAGATAATGAGTTGAATGAAGACAAGACAGAAATAGCACCACATACAAATATCAAAATCCAAGAACGGGTGAACTTGTTGGATAAAACAGAGGGAGTAAGGATTGTTTCCAATAATGACGTTGTGGTTACTTCAGCTTCTACAGATACTCGTACAAGATTGGAAAAGTATAAGCAGTTTGTTGATCTCAATGATTCACAAATTTCTCTGCTAGTGGAGGCGATAGAAGCATATCCTCATCTTTGGAATGCGTGTGAGAAGTTCACTGATCGCTTTCGAGCTTGGATGTTGAAAACATTGGTAGATATGTTGTTGTTCCTTCGAAGTGAAAGTGTTGGTAGTATTAATCCTCATAGAGAAAAGGAATTCCTTAAACTATGTGATGAAGCTGTTCAACTTGGATTTGAGAGGTCTTGGGTTGATCAAATGCGTCAACGTGTTTTGGGAAGGGATCCTAAGTTGGACCATGCAAAGGTGCGAATCAATGAGCTTCTTAAGAGACATGATCATTTAACTTGGGAACTAGACAACATAAAGAAAGAACTTAGGAGTCTTAATGACTTTCTTAATGCCCAAGCAAAATGTTTTGACTTTCTGTGA 5787 0.3529 MDILYGFLSGVLKDVACGATNQLQYSFCFNSFVKELEKEEDNLIEMIRSVEDRVIHARRQTLKTTEVIDKWLENANIDSEYVNRLLRETNAKKSCFFEFCPNWIWRYRLGKKLAIKKADLQKIIQDGRQYIQLQRIASIPSNTFDILTEKSMNFDSRKFAFDQLMEAVKDDGVAMIGLYGMGGCGKTTLAMEVKKIAEVEHLFDRVIFVPVSSTVEVPRIQEKIASSLHYTFPENQEMERSQRLCMRLTQEKKILMILDDVWEKLDFGRIGISSSEYHKGCKILITTRSEDVCILMDCQKKIYLPILTDEEAWTLFQNKALMSKDTPENMQHLAISISKECKGLPVAIVAVASSLKGKKEAIWHSALNKLRSSKPINISRGLQDPYMCLKLSYDNLDTDEAKSLFLLCSVFPEDYEISVECLIRCAIGLGVAGEVDIYEEARTEVTAAKIKLVSSCLMLEAGDERVKMHDLVRDVAHWIAKNENKIIKCELEKDVSLEEGSIRYLWCVKFPDGMDCSNLEFLSIQTKLEVSDGIFERMGKLRVLIITNKNGYRLQLSTTSFKSLTNLRCLVLQYFALRDISFVRDLKKLQSLSFHRCSCSSFLDLQTDVAVTTLTNLKLLEFISCDIESNIFEEIKRIPFLEELYILENGQRYNNEENVKFFNSFSVPHTLQRFGIILGYDIWQLEFCSYERTLRINYFDISNEVIKGLAGKARELYVGNIEGGAKNMMPDIFEIEEGMNELKELRIRDCEEIVCLVDTSNHLSKMGNIFSKLRLMRIMSMNNLKTLWHGCLPANGCFEKLENMYIEDCHQLTCLFTNIIVPTNDKTKKSEDQFRNGHSMQSKIFQNLQEVRIYHCRELKHVFSTSISGDLSQLKMLEIKYCHMLEQIIEEVLPPPAHHEETNEIVEEDVQSSSGSFFLSSLALLKISSCSMLESLFTISVAKTLTSLEKLKISNCHGLKHIVPPARVKRNKNMVEDEHEFENDLSMFSNLKSIFIRECVSLQDIFATPVNECFEKLEKVYIDNCPQLTYLFTYVAQGLTELKILHIYNCDILKHIITYDDKTKKSEDQFTSRHSVQSRIFQNLEEVMLDECGELKHVFSANIIGGLPQLKKLEIENCNMLQQIIVEEDECQHFESNQVKVSPESISIPSVSTVNNISGSFSLSSLALLSIKYCLMLDSLFTTSVAKTLTSLEELDISNCDGLKHIVSPERVKRNKNMVEDEHEFESNLSMFSSLKWVKISRCDSLQDIFIMPFVGGTVNIQNHFSTQQTLRMSNANNGDWMMGQQVSLKLEFLKLSYLHEMTHIWVATNNSFTLQHLNSLIIEECEKLEVIFPQSMLRSLPELNYLQVSECKELRQIIEEDLEDKSLFAQPCFPKLDSLVIERCHKLKCFTSVIASNALSNLRILIIKEATELQEFIACEYDETVKTKVELPQLKLIIFMDLSNFQQESIFSNVKHRIIRNCPKLSLTSTITPQELQQNYPLEGLGMSETIRLEISSLMYEIKKLDEVSTNNNSTELPSSQEVAPATTASYFTDQQSPLGQTQSTIKMSQQDWDPTPKNTSPLQMNREDQSTSQIKPFSSQVNDNNQSMLESRVEMVGQHNKIETKTQAPEIEEFQKIDRKNEMASDPQAMDQNFPVISSPNMTQRTDEIETDNLGKTTTSDKPAIPTFVSENIEEIGRERRRGGPAIEGVTIKTLPIGGDNISLVSGVTIHNSSGANILSQDSQIVKQDNELNEDKTEIAPHTNIKIQERVNLLDKTEGVRIVSNNDVVVTSASTDTRTRLEKYKQFVDLNDSQISLLVEAIEAYPHLWNACEKFTDRFRAWMLKTLVDMLLFLRSESVGSINPHREKEFLKLCDEAVQLGFERSWVDQMRQRVLGRDPKLDHAKVRINELLKRHDHLTWELDNIKKELRSLNDFLNAQAKCFDFL* 1929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0087 1928 Gene3D Ribonuclease Inhibitor 826 975 IPR032675 -
Vra6g0087 1928 Gene3D Ribonuclease Inhibitor 1218 1529 IPR032675 -
Vra6g0087 1928 Coils Coil 33 53 - -
Vra6g0087 1928 Gene3D - 306 392 IPR042197 -
Vra6g0087 1928 Gene3D Ribonuclease Inhibitor 499 820 IPR032675 -
Vra6g0087 1928 Gene3D Ribonuclease Inhibitor 976 1217 IPR032675 -
Vra6g0087 1928 Coils Coil 1890 1910 - -
Vra6g0087 1928 Gene3D - 141 303 IPR027417 -
Vra6g0087 1928 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 21 1066 - -
Vra6g0087 1928 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1080 1138 - -
Vra6g0087 1928 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1150 1396 - -
Vra6g0087 1928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
Vra6g0087 1928 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Vra6g0087 1928 SUPERFAMILY RNI-like 843 1126 - -
Vra6g0087 1928 SUPERFAMILY L domain-like 464 1201 - -
Vra6g0087 1928 Gene3D - 393 478 IPR036388 -
Vra6g0087 1928 PANTHER - 21 1066 - -
Vra6g0087 1928 PANTHER - 1080 1138 - -
Vra6g0087 1928 PANTHER - 1150 1396 - -
Vra6g0087 1928 MobiDBLite consensus disorder prediction 1535 1584 - -
Vra6g0087 1928 PRINTS Disease resistance protein signature 175 190 - -
Vra6g0087 1928 PRINTS Disease resistance protein signature 248 262 - -
Vra6g0087 1928 PRINTS Disease resistance protein signature 341 355 - -
Vra6g0087 1928 PRINTS Disease resistance protein signature 943 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0087 Vra-Chr6 559269 572850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0087 176 505 WRKY Transcription Factor Family AT5G45050 24.561 1.16e-09 62.0