Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0025 ATGAGCAAAACTCACCCACATTGTCGACGTGACATCACGTGGATTTTACTCTTTCTGCTTCTTGCTCTTCTTCTTCCGTGTGTGGTTGATGGTGACGGCGATGGCGATCAGTGTAAATGCAAAAGCGATAAAGAAGAAGGTGGAGAAAAGATTGACAAGAATTTGGCCAAGAAGTACAAAATCGGAGCTCTTGTTTCGATTCTGGTTGCAAGTGCAGTTGGCGTCAGCCTTCCAATGCTCAGCAGAATTTTACCCGCCTTGCATCCGGAGAAGGACTTCTTCTTCATGGTGAAGGCCTTCGCGGCTGGGGTCATATTATCAACCGGTTTCATTCATGTTTTGCCAGATGCTTTTGAAAAGCTGACACCTCCCAGTCTCTGTAATCATCCCTGGGACGATTTTCCGTTCGCCGGATTTGTGGCAATGGTGGCAGCCATCGGAACGCTTATGGTTGATTCTCTTGCGACTGCGTATTTTAAAAAGTCCTCGCTAAGCGCCATGGACCGAGTTGCTGACGAAGAAGATCTGCATGAACATAATCGCCATGCAACTCATCATTCTCATTCTCATTCTCACGCTTCCATGTCTTCTCCTTCCACGAACCTACTTCGCCATCGCGTTATTTCTCAGGTGCTGGAGCTGGGGATTGTGGTGCATTCTGTGATAATAGGGATATCTCTGGGTGCATCTGAAGATCCTAAAACGATAAGACCTCTTATTGCTGCTTTAACTTTTCACCAATTTTTTGAAGGCATGGGGCTTGGTGGTTCCATCTCACAGGCAAATTTTAAGAGAGGAGCAATTATAGTTATGGCGTTATTCTTTTCGTTGACAACACCTGTGGGGATTGCAATTGGTATGATAATCAGTGGCAATTACAAGGAGGAGAGTCCAACGGCTCTGATCGTAGAAGGTATTCTTAACGCAGCATCAGCAGGTATCTTAATTTACATGTCATTGGTGGACCTTCTTGCGCCTGATTTAATGAATCCAAAGATCCAAGCAAGTAGCAAGCTTCATATTGGAGTTAACACATCTTTGCTTATTGGGGCTGGGTGCATGTCACTTCTTGCAAAATGGGCCTAG 1086 0.453 MSKTHPHCRRDITWILLFLLLALLLPCVVDGDGDGDQCKCKSDKEEGGEKIDKNLAKKYKIGALVSILVASAVGVSLPMLSRILPALHPEKDFFFMVKAFAAGVILSTGFIHVLPDAFEKLTPPSLCNHPWDDFPFAGFVAMVAAIGTLMVDSLATAYFKKSSLSAMDRVADEEDLHEHNRHATHHSHSHSHASMSSPSTNLLRHRVISQVLELGIVVHSVIIGISLGASEDPKTIRPLIAALTFHQFFEGMGLGGSISQANFKRGAIIVMALFFSLTTPVGIAIGMIISGNYKEESPTALIVEGILNAASAGILIYMSLVDLLAPDLMNPKIQASSKLHIGVNTSLLIGAGCMSLLAKWA* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0025 361 MobiDBLite consensus disorder prediction 179 198 - -
Vra6g0025 361 PANTHER ZINC/IRON TRANSPORTER 37 361 - -
Vra6g0025 361 Pfam ZIP Zinc transporter 59 358 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra6g0025 361 PANTHER ZINC TRANSPORTER 1 37 361 - -
Vra6g0025 361 TIGRFAM zip: ZIP zinc/iron transport family 49 361 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0025 Vra-Chr6 202313 205025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0025 38 361 Inorganic Solute Cotransporters AT3G12750 54.925 1.51e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0025 K14709 - rcu:8279565 409.068