Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2873 ATGGCCACTTGTCCACCCAACGTCAATGTGGTTGCTGAAATCAATGAGGAAATAAATACGGATTATGATAGTTATTTAGAGTTGGTTCCTACTTCGAACATGTGTTTTGACACAATGCAAGAGGCAAAGAAATTTTATTCTGACTATGGGGAAGGTAAATATGTTTCCAACATTCGTCTAGAGGTCAAAACTCTTCCAAGTCAGACTAATCAATGTCCTGCTGGAATAAGCATTGCACGAAAAGTGGACAAATGGTTTGTTAGGACTGTAGTTTTAGATCACAGTCATGAGCTGTGTCCACAAACCTCCAATTTAATCCATGGTAATAGGCAATTGAACATGCATGCAAAGCACACTTTGAAAGTGAATGATGATGCCAGTGTACGTATTAATAAGAGTTTCCTTAGCAGAGTTAGTGAAGCTGGTGGATATGAAAACATGCAATTTGTGGAGCGAGATGCTAGGAACTTCATTGGTCAACATAGAAGGTCACTGTGTAAGGAGGATGCTCGAAGCCGAGCTGCATGTGAGGAGTTCGGTGATGTAGTGTCGTTTGACACCACGTACTTAACCAACAAGTACGACATGCCATTTGCTCCATTTGTAGGAGTTAACCACCATGGACAATCCATTCTACTTGGTTGTGGATTGCTCTCATCTGAGGACACTTCTTCATTTATATGGTTATTCAAATGTTGGTTAAGATGCATGGGAAACAAGGCGCCTGACAATATTGTAACTAATCAATGCAAGGCCAAGGCAAATGCAATTGAAGAAGTCTTCTCAAACACAAAACATAGGTGGTTTTTGTGGCACATAATGAAAAAGATACCTGAAAAATTTCAGGGATATAAGAATTATGTTGGTATTAAGTGTGATATAAAAGTGGTTGTCAATGAATCTGCTAATTCAATGGACTTTGACATAGGTTGGAAGCGACTACTTACCACACATGGCTTAGAAAATAATGAATGA 975 0.3908 MATCPPNVNVVAEINEEINTDYDSYLELVPTSNMCFDTMQEAKKFYSDYGEGKYVSNIRLEVKTLPSQTNQCPAGISIARKVDKWFVRTVVLDHSHELCPQTSNLIHGNRQLNMHAKHTLKVNDDASVRINKSFLSRVSEAGGYENMQFVERDARNFIGQHRRSLCKEDARSRAACEEFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTSSFIWLFKCWLRCMGNKAPDNIVTNQCKAKANAIEEVFSNTKHRWFLWHIMKKIPEKFQGYKNYVGIKCDIKVVVNESANSMDFDIGWKRLLTTHGLENNE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2873 324 Pfam MULE transposase domain 182 276 IPR018289 -
Vra5g2873 324 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 324 IPR031052 GO:0006355
Vra5g2873 324 PANTHER OS03G0843700 PROTEIN 63 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2873 Vra-Chr5 36991241 36992416 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra5g2873 MULE 5.8e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2873 - - vra:106760698 677.167