Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2868 ATGGAGGTTCAGATACGTGTTTTTTGTCTCTTGTTGTTTCTCTTGAGTCTGCTCTCGGGGTCTCAGGCCTACACCTTCTACGTTGGTGCGAAAGATGGGTGGGTTTTGTACCCTTCTGAGAATTACAATCACTGGGCTGAAAGGATGAGGTTCCAAGTCAGTGACACTCTTGTTTTTAAGTACAAGAAGGGATCGGACTCGGTTTTGGTGGTGAACAAGGAGGATTATGAGAAATGTAACAAGAAGAAGCCGATCAAGAAGTTTGAGGATGGTGACTCCGAGTTTCAGTTTGATCGGTCGGGTCCCTTTTATTTCATCAGTGGAAAAGATGATTACTGTGAGAAGGGTCAGAAACTTATCATTGTGGTGTTGGCTGTGAGGGAGCCTCCTCCATATTCTCCATCGCCACCAAATCTTCCACCTCCTCCAAAAACTCCTTATCCACCCCATCTTCCCCCAAAAGCACCTTCACCTTCATATCATCCACCCCATCTTCCCCCAAAAGCACCTTCACCCTCATATCATCCACCCCATCTTCCATCACCTCCACTTCCTCCAACCACTCCCTCTCCTATTCCTTCCCCTACCCATCAACCTCCCTTTGTTCCAATAACACCATCGCCATTTTCTCAAACACCTTATGTGCCACCACCACCCAAAACTCCATCTCCTACTTCTCAACCACCGTCCAACACTCCTTCCCCCACCTCACAACCACCTTACATTTCCACACCACCATCCACCGCCCCTTCTCCCATTTCCCAACCTCCCTACATTCCAAAACCTCCAAACGCTCCTTCTCCAACATCTCAACCACCCTACCCTAATGCCCCAACTCCATATCCCAATTCCCCTATCATTCAACCCCCATCATCAGCATCATCTCCAACTTCCTCATCACCCTATCCATCCACCATCCCTCCATCATACCCACCTTCCCCCTTCGCTCCGGCTACTACACCCTCCACTGCTTCACCACCAATACCGTCTCCGGCAACCGCCACTTCTCCTCCGGCACCACTACCGGCAGCAACAAGCCCATCGCCGTCGTCTTCGTCGGGATCGTCCTCGAACGAAACGACGCCGTCCCGGCCAAACGGCGCGTCGTCTATATCTGAATCGCGTTTTGGAGTGTACTCACTAACCATTCTGGTCGGTGCTGCTCTCAGTACCATTCTTGGTTAG 1185 0.5063 MEVQIRVFCLLLFLLSLLSGSQAYTFYVGAKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKGSDSVLVVNKEDYEKCNKKKPIKKFEDGDSEFQFDRSGPFYFISGKDDYCEKGQKLIIVVLAVREPPPYSPSPPNLPPPPKTPYPPHLPPKAPSPSYHPPHLPPKAPSPSYHPPHLPSPPLPPTTPSPIPSPTHQPPFVPITPSPFSQTPYVPPPPKTPSPTSQPPSNTPSPTSQPPYISTPPSTAPSPISQPPYIPKPPNAPSPTSQPPYPNAPTPYPNSPIIQPPSSASSPTSSSPYPSTIPPSYPPSPFAPATTPSTASPPIPSPATATSPPAPLPAATSPSPSSSSGSSSNETTPSRPNGASSISESRFGVYSLTILVGAALSTILG* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2868 394 MobiDBLite consensus disorder prediction 131 289 - -
Vra5g2868 394 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Vra5g2868 394 MobiDBLite consensus disorder prediction 301 345 - -
Vra5g2868 394 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Vra5g2868 394 MobiDBLite consensus disorder prediction 131 373 - -
Vra5g2868 394 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 300 - -
Vra5g2868 394 CDD OsENODL1_like 24 124 IPR041846 -
Vra5g2868 394 MobiDBLite consensus disorder prediction 346 373 - -
Vra5g2868 394 Gene3D - 22 127 IPR008972 -
Vra5g2868 394 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Vra5g2868 394 PANTHER BLUE COPPER PROTEIN 1 300 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2868 Vra-Chr5 36917007 36918598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2868 1 208 Phytocyanin Superfamily AT5G53870 45.740 9.55e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2868 - - vun:114185605 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2868 5 36917007 36918598 Vra5g2868 5 36917007 36918598 ECH