Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2862 ATGGGTTCTTCATCCTCTTATTCCTCCTTCTCTTCTTCTTCTGCTTTGTCCTCCTCCTCCTCCTCATCTTCTTCTACTGTGAACAATCCCACCTGCATGCAGTGCAACTCCAACATCACAACCTTGGTTACGGGGTGGCCTCTTGGTGATGGTAATGTAGCTCAGCTCTGCCACCGATGCGGCATATTCTATCAAGAAGGAACGTTTTGTGAGACATTTCACAGGNACTCTACGGGATGGTTAGAGTGTGCAGTTTGCCTGAAGAAGTTGCATACTAATTGCATTGTGTCAAGGTCAGAAGTTCACTTCATGTTGTTTGGAAGACTTTGTTGCAAGGTTTGTGCAACGAAACTGATTCGAAGATGA 366 0.4536 MGSSSSYSSFSSSSALSSSSSSSSSTVNNPTCMQCNSNITTLVTGWPLGDGNVAQLCHRCGIFYQEGTFCETFHRXSTGWLECAVCLKKLHTNCIVSRSEVHFMLFGRLCCKVCATKLIRR* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2862 121 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 29 116 - -
Vra5g2862 121 MobiDBLite consensus disorder prediction 1 30 - -
Vra5g2862 121 ProSitePatterns Zinc finger PHD-type signature. 32 114 IPR019786 -
Vra5g2862 121 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 29 116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2862 32 115 B3 DNA Binding Superfamily AT2G30470 42.529 1.77e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2862 - - pvu:PHAVU_005G086100g 152.91