Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2833 ATGAAGAAACCGAAGCAAACTCAGTTGAATCCGAATTGGCTTCAACTACAACAAAAGCTGAATGACTCTAAGGCTTCAAGGTCCTTCAAAACTTCAGATAAAGTTACCCCAGAATCAATATTGGGGAAACGTAAAGAGAGACCAGACGAGGAATCCAATGATAGTCAGATTAATCCTCTTACTCCTGTAAATAATGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGCGTTGGTCAAGGAAACAAAAGTGCTCTTGGAAGAGTAACTCTGGTCAATAAGTGGGGAAATGTTATTTATGATGAGTTTGTACGGCCAATGGAACGGGTTGTTGACTTCCGCACTAAAATCAGTGGCATAAGGCCTCGAGATCTTAGAAAAGCAAAGGATTTTTGGACTGCTCAGAAGAAAGTGTCAGAGTTGATCAATGGAAGGATCCTTGTTGGTCATGCCTTGTCCAATGACTTTAAGGCATTGTTATTAAGTCATCCCAAAAAGGATATACGAGATACCTCCGAGTATCAACCATTTCTAAGATCAAGTAGCAGAAGAGCACTGCGACATCTTGCTGCCGAACATCTTGGCGTGCAGATCCAAACAGGAGAGCACTGTCCAATAGAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGACATAAGAAGGAGTGGGAAAAGAGCATAAAAGATCAATTTCGGTTGAAACAGAAGCAAAGGAAATCGAAGCAGAAAAAGAAGCACAAGATTGAAGAAGCTTCAAACGCAAACCATGTTGAAATTGAATCATAG 798 0.4123 MKKPKQTQLNPNWLQLQQKLNDSKASRSFKTSDKVTPESILGKRKERPDEESNDSQINPLTPVNNDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTKISGIRPRDLRKAKDFWTAQKKVSELINGRILVGHALSNDFKALLLSHPKKDIRDTSEYQPFLRSSSRRALRHLAAEHLGVQIQTGEHCPIEDARAAMLLYQRHKKEWEKSIKDQFRLKQKQRKSKQKKKHKIEEASNANHVEIES* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2833 265 Coils Coil 238 258 - -
Vra5g2833 265 SUPERFAMILY Ribonuclease H-like 72 228 IPR012337 -
Vra5g2833 265 MobiDBLite consensus disorder prediction 1 25 - -
Vra5g2833 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 20 250 - -
Vra5g2833 265 MobiDBLite consensus disorder prediction 26 53 - -
Vra5g2833 265 Pfam Exonuclease 73 220 IPR013520 -
Vra5g2833 265 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 20 250 IPR034920 -
Vra5g2833 265 CDD REX4_like 73 221 IPR037431 GO:0006364|GO:0008408
Vra5g2833 265 MobiDBLite consensus disorder prediction 1 65 - -
Vra5g2833 265 MobiDBLite consensus disorder prediction 233 265 - -
Vra5g2833 265 Gene3D - 68 249 IPR036397 GO:0003676
Vra5g2833 265 MobiDBLite consensus disorder prediction 250 265 - -
Vra5g2833 265 SMART exoiiiendus 71 229 IPR013520 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2833 72 226 C2H2 Transcription Factor Family AT5G40310 37.427 1.60e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2833 K18327 - gmx:100819122 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2833 5 36230738 36236795 Vra5g2833 5 36230738 36236795 ECH