Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2808 ATGGCTACCTTCTCCGAGGAACGCGAGAACTTTGTATATGTTGCAAAGTTAGCTGAACAAGCTGAACGATATGATGAAATGGTGGATGCCATGAAGAAGGTGGCGAAGCTGGACGTTGAGCTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCGTGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAACGCATAAGGGATTATAGGCACAAGGTCGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAAGCCGGTGATGAAAAGAATGAGGTAGCAGATCAGTCACTTAAAGCATATCAGACAGCTGCTACCACTGCTGAGAGTGAATTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAGTGAATTCAGCTGAAAGGGCCTGCCATCTTGCTAAGCAAGCGTTTGATGATGCTGTCTCAGAGCTAGACTCTCTGAATGAGGAATCTTACAAGGACGGTACCTTGATCTTGCAGCTGTTGAGGGATAACCTTACTTTATGGACTTCTGATATCCCTGAAGAGGGTGGTAACATATAG 741 0.4278 MATFSEERENFVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIRDYRHKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGDEKNEVADQSLKAYQTAATTAESELQPTHPIRLGLALNFSVFYYEIVNSAERACHLAKQAFDDAVSELDSLNEESYKDGTLILQLLRDNLTLWTSDIPEEGGNI* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2808 246 Pfam 14-3-3 protein 15 236 IPR023410 -
Vra5g2808 246 PANTHER GENERAL REGULATORY FACTOR 2 3 243 - -
Vra5g2808 246 SMART 1433_4 8 245 IPR023410 -
Vra5g2808 246 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Vra5g2808 246 Coils Coil 14 34 - -
Vra5g2808 246 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Vra5g2808 246 PIRSF 14-3-3 2 245 IPR000308 -
Vra5g2808 246 Gene3D - 2 244 IPR036815 -
Vra5g2808 246 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Vra5g2808 246 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Vra5g2808 246 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Vra5g2808 246 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Vra5g2808 246 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Vra5g2808 246 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Vra5g2808 246 PANTHER 14-3-3 PROTEIN 3 243 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2808 Vra-Chr5 35636829 35639566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2808 5 245 14-3-3 family AT2G42590 77.178 6.52e-142 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2808 K06630 - gmx:100806167 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2808 5 35636829 35639566 Vra5g2808 5 35636829 35639566 ECH