Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2785 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAGAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGTTCAAGTTTGCTGGCAATGAGAGGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGTGTTGGACAGAGTGAGCAAGAGGAGCAGCAATGATGTTGAGAATGGTGGCGAAGTGGAGAAACAGCAAGAGAAGGTGCAGAAGGAGGAAGTGGAGGAAGGTGAATTGGGCACTTTGAAGTGGCCTAGGACTGACCTGGAAAATGGGGAGTTCGTGCCAGAGATGCCGCCACCAGCCCAACCGAGGAAGGGTGAGATTGAGAACGGGGAGATTGTGAGTGAGAAGTGGAAAGGAAGGGAGCTGGAGAAGGGGGAGATTGCTTCTGGAAAATGGAGGAAAGAGGATGTTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGGGAAGCTGAGAGAGGTGAATATGGGTCATGGAGAGGTGTAAATGATGAAATTGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGGGGATTATGACAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGTGGAAAATTGAACGTGAACGTGAAAGTACACCTTCTTCTGGGAGATATTCTGGGGATGATTTTTTTAGGAAGAAGGATTTGAATATTCGTGGGAGTCAGCATCCTAAAAGTTCTCCCAGGTGGGAGGGTGGACAACAGCGGAATGTAAGGATCAGTTCTAAGATTGTGGATGACGAGAAGAACGTTCACAGCAATGGTAAGGACCATGCACGAGATTACACTTCTGGAAGTCGGTTGAAGAGGCTTGGTAATGATACTGACAGCTATGAGCGGAAGCATTCTGCAGATTATTCCGGTTTAAAAAGCCGAAGACTTTCTGATGATAGCTGTCGCCAAGTTTATTCAGAAAACTATTCTCGTCGTTCTGTGGAACGGTCTTACCGAACTAATAATGCTACCAAAGTATCGGCAGATAAATATGCAAGTAGGAATCATGAATCTTCTTTGTCTATTAGACAGGCTTATGATAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGTGACCGAGGCAGGTATTATGATCATAGGGATCGAACTCCAGTACGCAGGTCTCCTTGTGGTCGTGACAGATCTCCATATAACCGGGAGAAGTCCCCACATGGACGGGAGAGGTCCCCATATCCGTATAACCGGGAGAAATCCCCCTATGGTCGGGAGAGGTCGCCATATACAAGGAACTGGGACAGAAGTCGTCAGCCTGATCATAAATTGAGAAGTCCGACCCGTTCTGAGCAGTCACCACCCGATCGAAGTCGGCGACACGATCCTAAGGATAGTACCACAAATTTGTTAGAAGCATCTACCCTTGATCAGGCTAGGAAAGACAGTCGACGTGATTCAAGTTGTAAAACCTTACCAAGTGAAAAACATGATTCCCAAAATTCTTGTAAGGATCAAGAGGATAAGCAGACTCAGAGGGATTCAAACTGTTCAAGTACTGAATCTCAGAATGAAAAAAGTGTGCAAGAGGCCATCAAGTCAGTTGAGAAAGACATCTGCAATCAACCTTTAAACGAACACCGGAGTTGCAGTCCAACCGTTACCCACAAAGAATCTCCTCTCTCCGAGCCACCTCCTGAGGAGATGCCTTCTATGGAAGAGGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCTTCAGGGAAATGGTATTACCTGGACTATGGTGGTGTGGAAAATGGGCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGAGGAAGGGGTACTAGTGTCAGATCACTTTATCAAGCACATAGATAGTGACAGGTGGTTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCAGAACTTTCCTTCAATTGTGTCAGATAGCATAACTCAACTGGTAAATCCCCCAGAAGCTCCTGGCAATATCTTGTCAGATACAGCTGATATTTTTCAATCTGCTCACGAGAATCACCAGGAAATGCTAACCCCCTCACCGCCTCCACTAGTGTGCCCCATTGACAGTTTGCGTTCATCTGAACTTTTGGAGGACTTCCACATTGATGAAAGAGTTAAAAATCTCTTGGAGGGTTATGATGTCACTCCTGAGATGGAACCTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAGAGGGGAGGAATCGAGAGATTATGAAGGTTTTCCTTGGAATGTTTCCTGCCTTGGGGAAGATTATGATTCTAGTACTGATTTAGCATCTAGAGATTCTGAGTCTCAGTTAAGTATGTCATCTGATAAGGATAATGGACTAGGCTTTGGTATATCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAGGGTGGTGACTGGAAGAGGAATGATGATTCCCTGGATAGATATTCTAGAAAGAAACTTGTCCTAAATAATGGTTTTTCGTTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGAACTGTATTTTCCTTCTCAAAACAAGAGGCTTGATCTTCCTCTGTGGGCTTTCTGTGCTGATGAGCGGGATGAATGCAGTGCTGCAGGTAGATCAGTTCAAAGTAAGTCTGTTTCTGTGAGAGGAGTGAAAGGCAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTAGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGCCACAAGACGCGGGGCAAGGAAAGACATCATTCTAGGTCAAGTCGGCCCTTCTCTGCAACCAGTGATAGCAAGAGATCATCAACTGAACATGATTCCCAGTTAAAGGCTTTTAGTGATCAAGGTTCTTACAGGATCATGGAATTCCTTAACACTCCCAAAGACCATCTTTGTACTGTCCATGAGTTGCAATTACATTTGGGTGACTGGTATTATTATGATGGTTCTGGGCGTGAAAGGGGCCCCTCATCATTTTCAGAGCTACAGTACTTAGTAGATCAGGGTATCATAAAAAGGCATAGCAGTGTGTTCAGGAAAAGTGACAAACTCTGGGTTCCTATCACCTCTGGAACAGAAACATCTGATGGCAGTCTCACGATCCAACAAGAAAGCAGTTCAATATCTGGTTTTTCATCAAAGCAAACTCAGGCATGTGGTGAACCTTACACAAATTCAAGTTTGTTTAACAGCTTGCATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACATGAGCTTGTGATGAAATCATATAAGAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCGAAGAAAGAAATTGAAAAACAACTATATTGGAAATCAGGTGATGCACATGCAACCAAGAGAGCCCGGTTACTTGTTGATGATAGTGAAGATGACAGTGATTTGGAAGATGGTGATTTTACTGTCGAGAAGGATGAATCTAGTTTTGAGGATCTATGTGGTGATGCTACTTTTCCTGAAGATGAAATTGGTGCTACTGATTCTCAAATGGGAAGCTGGGATAATTTAAATGGCCGTGTGCTAGCACAGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCATTGACTTGCAAGCGCTGGAGAGCTTCTGTAAGGTTTTATAGAGAAGTGTCAATGCAGGTCAATTTGTCATCCTTGGGTCATTCCTGCACTGACGCCATGTTGTGGAACATTTTGAATGGATACGAGAAAGAGAAGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACAGCTGAGACGCTTGAGAAAGTTCTTCTTTCATTTCCTGGTTTATTTACAGTGGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAATTTGCAAATGTGAAATGGATCAAGAGCCGGAGTTCATACTTGACTAAAATTTCCGAGGATCCTCACAAAATTAGAAGTCTTAAACACATTACAGAGCTAGCCTCATCTGTTTCCAAATCCAGCAGTATAGGTATAGATGATTTTGGGCAATTGAAGGACTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTGTTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCCTCCTCCATTCTATCGAGGGATGCTCGAACAAGACGTTGGGCAATCAAGAAAACTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTCCGTGAAATTATGAAGACAAACTCTTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAAATGGTTATTATAGTAGCCGTGGGTTGAATTCTGTGAAAGAGGACATAAGTAGAATGTGTCGTGATGCCATAAAAGTGAAGAATCGGGGTGATGCTAGTTACATGAATCATATTATCACCCTGTTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCTAAATCTGTGCATGAGAGAAATCTACTGAAATCGTGGGACAATGACTTGCCTGCAGTGTCCTGCTCTACTCTGTCAAAGTATAAGAAGAATAGGTTAGTGAATGAAAGGAAGTATAGGAGTAATGGTACACATGGTTTGGATAATGTGGAATATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGTTGAACAAAAAATCGATGGACTCAGAGAGTGAAACATCTGATGATGATCTAGATATGTCTTATGAAGATGGAAAGAGTGACAGTGATACTACAACCTCTGATACTGAAAGTGAACGAGAAGTACATTCCGAAAGTCTGATTAGGGAGTCAAGAGGGGAAGGATTCTTGACATCTGAGGAAGAGTTGGATTTTATAACTGATGATCGAGAATGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCAGTTACCAGGAAATATAAAGTCATTGATCAATATTGCATTGTAGCTGACGAAGAGGACGTACGAAGGAAGATGAGGGTTTCATTGCCAGACGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGGCTCTGCCAGATAAGCATTTGTTTATAGAAGATACACTCCTTCGAACATTGAATAAGCAAGGTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCATTGCGGCCTGTTGTTGAAGATATTAAAAGACAAGCCGAGGAGGATTGTGACGCAAGAATGGTTAAAATGTGTCAAGGTATTCTGAAGGCCATGGACAGTCGTCCAGAAGACAAATACGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGATTTGCGGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAAAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATATGGCTAATTATGCCAGTCGAATATGTCATTCGTGCAGACCTAACTGTGAAGCCAAGGTTACTGCCGTTGATGGTCAATATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGACTACAATTCTGTAACGGAGAGCAAGGAGGAGTATGAAGCTTCGGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTGAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTTGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAGGACTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGGTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAACGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCGGACATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTACGGTATGTCATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAGCAACTGTTTCCTTCCTCTGGAAAGGTGAGGGTTCATTTGTTGAGGAGCTTCTTAAGTGCATCGCTCCTCATATTGAAGAAGAGATCTTGAAGGATCTCAAGCTTAAAATTCATGCTCACGATCCTTCAAATTCAGTAGATATTCAAAAAGAGCTTCGGAAATCTTTGTTATGGCTTAGGGACGAAATCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATCAAGCGATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTATCGAAAGATATATGGCGAAAATTATTGTTTAGGACAGCTGATATTTTGGCATAACCAGAGTAATGCTGATCCAGATCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTACCAGATACCAGTTCCTTTTATGCCAAGGCGCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACCGTGAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCGATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7158 0.4306 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLFKFAGNERRKMKARKSELVLDRVSKRSSNDVENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPAQPRKGEIENGEIVSEKWKGRELEKGEIASGKWRKEDVERGEIVPEKGGRKGEAERGEYGSWRGVNDEIEKGEFIPDRWYKGDYDSRIRRYHSGRDKGWKIERERESTPSSGRYSGDDFFRKKDLNIRGSQHPKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYTSGSRLKRLGNDTDSYERKHSADYSGLKSRRLSDDSCRQVYSENYSRRSVERSYRTNNATKVSADKYASRNHESSLSIRQAYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPHGRERSPYPYNREKSPYGRERSPYTRNWDRSRQPDHKLRSPTRSEQSPPDRSRRHDPKDSTTNLLEASTLDQARKDSRRDSSCKTLPSEKHDSQNSCKDQEDKQTQRDSNCSSTESQNEKSVQEAIKSVEKDICNQPLNEHRSCSPTVTHKESPLSEPPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVEEGVLVSDHFIKHIDSDRWLTVENAASPLAPQNFPSIVSDSITQLVNPPEAPGNILSDTADIFQSAHENHQEMLTPSPPPLVCPIDSLRSSELLEDFHIDERVKNLLEGYDVTPEMEPEAIKEVLLMNFENARGEESRDYEGFPWNVSCLGEDYDSSTDLASRDSESQLSMSSDKDNGLGFGISSDWFSTRWSCKGGDWKRNDDSLDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDELYFPSQNKRLDLPLWAFCADERDECSAAGRSVQSKSVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSSRPFSATSDSKRSSTEHDSQLKAFSDQGSYRIMEFLNTPKDHLCTVHELQLHLGDWYYYDGSGRERGPSSFSELQYLVDQGIIKRHSSVFRKSDKLWVPITSGTETSDGSLTIQQESSSISGFSSKQTQACGEPYTNSSLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSGDAHATKRARLLVDDSEDDSDLEDGDFTVEKDESSFEDLCGDATFPEDEIGATDSQMGSWDNLNGRVLAQIFHFLKSDLKSLVFASLTCKRWRASVRFYREVSMQVNLSSLGHSCTDAMLWNILNGYEKEKINSIILRGCVNITAETLEKVLLSFPGLFTVDIRGCNQFGELTLKFANVKWIKSRSSYLTKISEDPHKIRSLKHITELASSVSKSSSIGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKTESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKNGYYSSRGLNSVKEDISRMCRDAIKVKNRGDASYMNHIITLFIQLATRLEESSKSVHERNLLKSWDNDLPAVSCSTLSKYKKNRLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMDSESETSDDDLDMSYEDGKSDSDTTTSDTESEREVHSESLIRESRGEGFLTSEEELDFITDDREWGARMTKASLVPPVTRKYKVIDQYCIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWALPDKHLFIEDTLLRTLNKQGRNFTGTGSTPMSYPLRPVVEDIKRQAEEDCDARMVKMCQGILKAMDSRPEDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVGYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLKCIAPHIEEEILKDLKLKIHAHDPSNSVDIQKELRKSLLWLRDEIRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYQAITSPPVYISPLDLGPKYTNKSGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSSPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR* 2386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2785 2385 MobiDBLite consensus disorder prediction 210 244 - -
Vra5g2785 2385 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2384 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 1576 1629 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 932 969 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 60 131 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 553 567 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 1600 1629 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 486 523 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 210 540 - -
Vra5g2785 2385 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1966 2385 IPR045606 -
Vra5g2785 2385 Gene3D - 1200 1268 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 245 264 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 147 172 - -
Vra5g2785 2385 SUPERFAMILY SET domain 1830 1978 IPR046341 -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 265 323 - -
Vra5g2785 2385 SUPERFAMILY F-box domain 1199 1242 IPR036047 GO:0005515
Vra5g2785 2385 SMART set_7 1821 1961 IPR001214 GO:0005515
Vra5g2785 2385 Pfam SET domain 1897 1955 IPR001214 GO:0005515
Vra5g2785 2385 MobiDBLite consensus disorder prediction 363 476 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 552 580 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 60 97 - -
Vra5g2785 2385 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2384 - -
Vra5g2785 2385 ProSiteProfiles SET domain profile. 1820 1955 IPR001214 GO:0005515
Vra5g2785 2385 CDD SET_SETD2-like 1829 1977 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 324 362 - -
Vra5g2785 2385 MobiDBLite consensus disorder prediction 524 538 - -
Vra5g2785 2385 Gene3D SET domain 1798 1986 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra5g2785 SET 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2785 K22748 - gmx:100776205 4155.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2785 5 35079469 35094650 Vra5g2785 5 35079469 35094650 ECH