Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2769 ATGGAGCCTGTTTGCCCTATTGGGTTGGCGTGTGCCTCTGAAATCTCTGCTCTTCTCTCTCCTCCCTCACCTCTTCAAGTACAGGAATATTATCACAACCTTTTGTCTTCAAGAGGGTGCTCTGGTATCTCAGTCAAACAGGATGGCAACTTTGGAAAAGGTGTATATGCAGACATGGACTTCAAAGAGGGAGAACTTGTTCTGAAGGACCCCATGTTTGTAGGGGTTCAACATTCCCTTAACAAGATTGATTGTTTGGTCTGTAGTTTCTGCTTTCGTTTTATTGGTTCCATTGAACTTCAAATAGGAAGGAGGCTTTACATGAAGCAACTAAGGGCCAATGAGAGTCATGGATGTGATGTCGGAAACTCTTCACAACACTTCCATGGAATGGATTCATCTGATGAAGAAGAGAATACTCAGCAATGTACTTCTGGGATTTCCAAAACTAAGGTTCCTCTTCCTGAGGGTGTTGTGGAATCATTAATGAATGGCCAACTGGTTTTGCCTTGCTCCGAGAAGTTCACCTTGTTGCCGGCTGTTCCATGCCCTGGAGGATGTGGAGAAGCTTACTATTGCAGCATGTTATGTGCAGAGGCTGATTGGGAATCCTCCCATTTGCTACTCTGTACTGGTGAGAGTTCTGATCCAGCTCGTAGAGAGGCACTCCTTAAATTCAACAAACATGCTAATGAAACAAACGATATATTCATACTTGCTGCAAAGGCTATTTCTTCAACCATATTAAGATATCGCAAGTTGAAAGCAGCCAGTCTTGGAAAACAAGTGAAACATGATACATCCTGTGTTTCAAATCACCGTAGTTTATCTTTTCTTTTGGAAGCTTGGAGGCCTATATCAATGGGACACAAGAGAAGGTGGTGGGACTGTATTGCTTTGCCAGATGATGTGGATTCTTCTGACGAAGCATCATTCAGGCTGCAAATCAAAGAGTTGGCATTTGAGTCTCTACAACTTCTTAAGGCAGCCATATTTGACAAGGAATGTGAGCCATTATTCTCCCTTGAAATCTATGGACATATCATTGGCATGTTTGAGCTGAATAATCTTGATTTGGTTGTGGCTTCTCCGGTGGAGGATTACTTTTTATACATTGATGATCTGACACATCCTAACAAGGAAGAGGCTGAGAAAATTACGCAACCTATTCTGGATGCACTTGGTGAAGACTATTCTATTTGTTGCGAAGGGACTGCATTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTTGTCCTAATGCCAAAGCTTTCAAAAGAGATGAGGATAAAGATGGCCAGGCAACAATAATTGCACATAGGTTCATTCGTAAAGGAGAAGAGATAACCATATCATATGTTGATGAGGACCTTCCATTTGAAGAAAGGCAGGCATCCCTTGCAGATTATGGTTTCAGATGCAGGTGTCCAAAGTGCATTGAAGAAGAGCCATAA 1455 0.422 MEPVCPIGLACASEISALLSPPSPLQVQEYYHNLLSSRGCSGISVKQDGNFGKGVYADMDFKEGELVLKDPMFVGVQHSLNKIDCLVCSFCFRFIGSIELQIGRRLYMKQLRANESHGCDVGNSSQHFHGMDSSDEEENTQQCTSGISKTKVPLPEGVVESLMNGQLVLPCSEKFTLLPAVPCPGGCGEAYYCSMLCAEADWESSHLLLCTGESSDPARREALLKFNKHANETNDIFILAAKAISSTILRYRKLKAASLGKQVKHDTSCVSNHRSLSFLLEAWRPISMGHKRRWWDCIALPDDVDSSDEASFRLQIKELAFESLQLLKAAIFDKECEPLFSLEIYGHIIGMFELNNLDLVVASPVEDYFLYIDDLTHPNKEEAEKITQPILDALGEDYSICCEGTAFFPLQSCMNHSCCPNAKAFKRDEDKDGQATIIAHRFIRKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEEP* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2769 484 MobiDBLite consensus disorder prediction 129 148 - -
Vra5g2769 484 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 14 483 IPR044237 GO:0008168
Vra5g2769 484 ProSiteProfiles SET domain profile. 41 454 IPR001214 GO:0005515
Vra5g2769 484 SUPERFAMILY HIT/MYND zinc finger-like 174 211 - -
Vra5g2769 484 Pfam SET domain 52 453 IPR001214 GO:0005515
Vra5g2769 484 CDD SET_SMYD 393 479 - -
Vra5g2769 484 Gene3D SET domain 373 483 IPR046341 -
Vra5g2769 484 SUPERFAMILY SET domain 41 479 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vra5g2769 SET 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2769 - - gmx:100803651 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2769 5 34906422 34912536 Vra5g2769 5 34906422 34912536 ECH