Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2751 ATGGAGGAACGAGCATATCAATTACGGAGAAGCGAGCATCCCAAACATCCAGAAAAACCAAAGATAAGTCAGCGAGTTGCAAGTAGAGTTGGTTCAGTTATTCCTCTGTCTATTGATCACAAGCCCGATAGATCTGATGAACGTCAAAGGATTGAAAAGGCTGGGGGATTTATAATCTGGGCTGGAACATGGAGGGTCGGTGGTGTTCTTGCTGTGTCCTGTGCATTTGGCGACAAACTTCTTAAGCCTTATGTTGTCGCTGACCCTGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATTATAATTGTTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGTTGTGTCGTTAGTACAAAATATCACAGATGCAGAAGAGGATTTCGGTGTAGAAGGGTAA 411 0.4234 MEERAYQLRRSEHPKHPEKPKISQRVASRVGSVIPLSIDHKPDRSDERQRIEKAGGFIIWAGTWRVGGVLAVSCAFGDKLLKPYVVADPEIQEEEIDGVDFIIIVSDGLWNVISNKEVVSLVQNITDAEEDFGVEG* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2751 136 MobiDBLite consensus disorder prediction 1 24 - -
Vra5g2751 136 Pfam Protein phosphatase 2C 28 128 IPR001932 -
Vra5g2751 136 PANTHER ALPHABET, ISOFORM E-RELATED 23 130 - -
Vra5g2751 136 Gene3D - 23 132 IPR036457 -
Vra5g2751 136 SMART PP2C_4 1 126 IPR001932 -
Vra5g2751 136 ProSiteProfiles PPM-type phosphatase domain profile. 1 136 IPR001932 -
Vra5g2751 136 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 23 130 - -
Vra5g2751 136 SUPERFAMILY PP2C-like 26 125 IPR036457 -
Vra5g2751 136 MobiDBLite consensus disorder prediction 1 23 - -
Vra5g2751 136 CDD PP2Cc 26 124 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2751 Vra-Chr5 34642482 34644150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2751 23 129 PP2C-type Phosphatase Gene Family AT1G43900 73.832 3.87e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2751 K17506 - gmx:100776867 192.971