Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2710 ATGGCTTCTATAGAATGGCTACAAGAACAACTTACCATAGCTTTTCTTTCTTCTATTTGGTATCCATATTTTTTCTTCTTTCTTCTTGCTGTTGNTGTGTTGAAGCTAGCAAGAAGATCAAAAAACAAAGCCAGTTTCAATCTGCCTCCATCACCAAGAAAGTTACCAATCATTGGCAATCTTCATCAGATAGGCACATTGCCATACCGTTCTTTCAGTTCCCTCTCACAAAAGCATGGTTCTCTGATGTGGTTGCAGTTGGGGCAGACTAAGACTTTGGTGATTTCATCAGCAGATTTGGTGAGGGAAATCATAGAAAATCATGACATAACCTTCTCAAACCGACCCCAACTCACAGCAGCCAGGTACATGCTGTACGGATGTAATAACATTGGTTTTTTATCCTATGGAGAAAGCTGGAAACTGAAAAGAAAAATATGTTCCCTTGAACTTCTCGGTGCCAAAAGGGTGCAGCCACTTCACCTCATCAGGGAACAAGAGGTTGCAGAATTGGTAAAAAAGATAGGCAAAGCAACCTTGAGAGAAGCATCTTCTGTGAATCTAAGTGAGTTGCTTCTTGAAGTATCAGACAACATCATCTGTAAATGTGCTCTTGGACAGAAGGTCAATAGCAGCAGGGTCAAAGAGCTTGCAAGGAGGTTGATGATTCAATTTGCAGCTGCCACTGTGGGGGATTACTTTCCCTTGCTCAGTTGGGTTGATTTTCTGACTGGCAAAATTCAAGAATTCAAAGCCCTTTTTGAAGCATTTGATATCTTTTTAGATGAGTTAATTGAGGAGCATAAGCAGGTTCAGAGGGAAGCTGATCACCGCTCCACTGAAAACGACTTTGTGGATATCCTCATCCAATATCAGAAGAATGCCATGCCTGATTCTGAGCTCACCAATGATGACATCAAATCAATTATAATGGATTTGATTATAGCAGGAAGTGACCCAACTGCATCAACACTACAGTGGGCTATGGCAGAGCTGATGAGAAATCCAACGAAGCTGAAGAAAGCTCAGGAAGAGGTGAGAACAATTGTAGGGAATAAATCAAAAGTAGAAGAAAATGACATAAAGCAAATGGACTACATGAAATGTGTAGTGAAAGAAACTCAAAGGTTACATCCATCTGCTGCACTCTTGCCTCCTAGAGAGACATCATCTACATTGAAACTGAGAGGATATGATATTCCTCCCAAAACAATGGTATATGTGAATACATGGCAGATTCAGAGGGACCCTGAAGTTTGGGAAAGGCCTGAAGAGTTCATTCCAGAGAGACATGCTAATAACAATGTTCCTTTGAAAGGCCAATTTATTCCATTTGGTTTTGGGAGAAGGACATGCCCTGGAATGAGCTTTGGACTTGCTAATGTTGAGTATATACTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTACCTACATCTCATTCTTCTGTACAAGACATAGACATGACTGAGACATTTAGGCTTGTTACCTTCATGAAAGTGCCACTTCATGTCAAACCACTTCCCTTTGAATCAAGCTTCTAA 1545 0.4071 MASIEWLQEQLTIAFLSSIWYPYFFFFLLAVXVLKLARRSKNKASFNLPPSPRKLPIIGNLHQIGTLPYRSFSSLSQKHGSLMWLQLGQTKTLVISSADLVREIIENHDITFSNRPQLTAARYMLYGCNNIGFLSYGESWKLKRKICSLELLGAKRVQPLHLIREQEVAELVKKIGKATLREASSVNLSELLLEVSDNIICKCALGQKVNSSRVKELARRLMIQFAAATVGDYFPLLSWVDFLTGKIQEFKALFEAFDIFLDELIEEHKQVQREADHRSTENDFVDILIQYQKNAMPDSELTNDDIKSIIMDLIIAGSDPTASTLQWAMAELMRNPTKLKKAQEEVRTIVGNKSKVEENDIKQMDYMKCVVKETQRLHPSAALLPPRETSSTLKLRGYDIPPKTMVYVNTWQIQRDPEVWERPEEFIPERHANNNVPLKGQFIPFGFGRRTCPGMSFGLANVEYILANLLYWFNWKLPTSHSSVQDIDMTETFRLVTFMKVPLHVKPLPFESSF* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2710 514 Pfam Cytochrome P450 49 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 509 - -
Vra5g2710 514 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 Coils Coil 339 359 - -
Vra5g2710 514 PANTHER CYTOCHROME P450 71B11-RELATED 13 509 - -
Vra5g2710 514 Gene3D Cytochrome P450 33 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 Coils Coil 261 281 - -
Vra5g2710 514 SUPERFAMILY Cytochrome P450 49 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2710 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2710 Vra-Chr5 33730834 33733514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2710 18 508 Cytochrome P450 AT5G25120 39.563 5.76e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2710 K20617 - gmx:100785621 695.271