Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2705 ATGGAATCTCAATTAATAGACAGAAGTGATGCTATGGAAGTTTCTGGGAATGTGGATTTGAGTACATATGAAGTTCAGGTAGATCAAGAAACATATGAAGTGGATCCAAATGAGGGGTGTAGAGTACTAGAGAGTTCTTCTGGGGGAGAGTTGGGCATCTGTGATGATGATCATGCTATTCAGGAACCATATGAAGGCATGGAGTTTGAATCTGAAGATGCTGCTAAGATATTCTACGACGAATATGCACGACGTGTAGGATTTGTCATGCGTGTGATGTCATGCAGACGCTCAGAAAGGGATGGAAGGATTCTTGCCCGCAGGCTTGGGTGCAACAAAGAGGGTTATTGTGTCAGCATCCGGGGGAAGTTTTCATCAGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGGTGTAAGGCAATGATTCACATCAAATATGAGAAATCTGGAAAATGGGTGATAACAAAATTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCTCGTGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAGCTTCGGCATAAAAAACGGTTGTGTGCGACATATCAAGAACAACTTACTTCCTTTATGAAGGTTGTTGAAGAGCACAATGAAAAGCTATCTACGAAAATCCATCTTGTAGTTAATAATCTCAAAGAATTTGAATCCATAGACGAGATTTTGCACCAAACATAG 729 0.4102 MESQLIDRSDAMEVSGNVDLSTYEVQVDQETYEVDPNEGCRVLESSSGGELGICDDDHAIQEPYEGMEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKVVEEHNEKLSTKIHLVVNNLKEFESIDEILHQT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2705 242 Coils Coil 176 203 - -
Vra5g2705 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 241 - -
Vra5g2705 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Vra5g2705 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2705 Vra-Chr5 33698533 33702441 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra5g2705 FAR1 4.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2705 - - pvu:PHAVU_005G002900g 478.404