Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2686 ATGGAAAGTGAAAGAGAGGACAACAACAACGGCACTGATTCAACACACGCTGCCATCTCTAGCACACTTAAAATTAAGATTGTGAGCTGCAGCAAAAGTGGGGAGAGTTTAGACAACTCAAACTTACCTTCACCAAACATAAACAATGGCATAGAGTCATCACCATATGGTTCTCCTCTTGTGTCACCACCTTCATCTGCATTTGTTTCTGCATTGCAGTCTCCATATATATCTCCAAGGGCCATTATACCAGACCCACCTAACGGATCTCCTTTGGAAAACCAACCACCACTACTAACAATAACCACTTCCACCACCAACCCTTCCACCCCTGAAGATGTGCCAAGCAGTTCCTACACTCCCCCTTCTGATCAATATGAGTTCTCTGACGACACTGCTGACACAAGGCTCAAGTATGTGACATGTGTTCCTGAACCGGCTCCTCCACGCATTTCATTCTCATTTCCAGTCCCTAGAATTTCCTTTGCAAAAGGTCCTATCTCACCTGCTACCAATGCCAAACTCAGAAGCTGTGATGTCTATATTGGATTCCATGGCCAGAACCCCAACTTGGTGCGCTTCTGCAGGTGGCTTAAGTCTGAGCTTGAGCTTCAAGGGATCGATTGCATGCTTGCTGATAGAGCAAAGTACTCAGACAGTCAGAGTCATGAGATTGCTGATGGAGTCATTTGCTCAGTGGCTTTTGGAGTGGTGGTTGTCACAAGTTCCAGCTTCCTCAACCATTTTAGCATGGAGGAGGTGAGATTCTTTGCTCAAAAGAAGAACTTGATTCCCGTCTTGTTTGACACTGGACCTGCAGAGATTATGGCTCTTCTTAACTGCAAATCAATTGACAAAGAATGTAAGGAGGCAATAGATGGACTTATGAAGTGCAATGAATTCAATATAGAGGCCAATGATGGTAATTGGCGAAGCTGCATAGCGAAAGCTGCGGGTATTTTAAGAGCAAGACTTGGTAGGAAGAATGCTGAGCAGAAGGATAATGTACAAGGACATGAGAACTTACCCTTTCCAAGGAACACATACTTTGTAGGAAGAGAAAAGGAGATTATGGAGATTGAGGGTCTTTTTTTCGGTCGAGGGAATTGCATGGAACAAGTACAAGATCATTGTAGGGTATTCACCAAAGGAGAAGCTAGTGGAAGTGGACAATCTGAAGGCCTTGCAGATGAGGAAAGTGAACCAGTGATAGCAAGGTGTGGGAGGTATATCAGTCTAGAGATGGGGAGAAGCAAAGAACCAACTTTAGAGGCTTGGGTTGAACCGATCATGGGAAACAACTCTTTGAAGAGGTTGAAGAATAAGAAGTCAAAGAGTGGAAGCTACAAGAGCGTGTGTAGCAGTGTGATTTGCATTAATGGGGTTTCTGGGATTGGAAAGTCAGAGCTGGCACTAGAATTTGCTCATAGATACCACCAGAGGTACAAAATGGTTTTGTGGGTTGGTGGTGAAGCCAGGTATCTGAGGCAGAACTTATTGAACTTGTCTCTCAATTTGGGACTGGATGTTGGTGCCGATTCTGAAATGGAAAGGGGTAGGATTCGTAGCTTTGAGGATCAAGAATTTGAGGCATTCAAGAGAGTGAAGAGGGAACTGTTTGGTGAGACTCCTTACTTGCTGATAATTGACAATCTTGAGACAGAAGTGGAATGGTGGGAAGGGAAGGATCTGTATGACTTGATACCAAGAAACACAGGAGGAACACACGTGATTGTTACTACAAGATTGTCCAAAGTAATGAGCTATGATACAATTCAGCTTCCACCTTTGCCATTATCTGATGCAATGATTCTGATGATAGGAAGAAAGAGGAAAGAGTATTCGGCAGATGAGATAGACCTGCTTGAAAAAATCAATGAGAAACTTGGAAGGTTGAGCATTGGTTTGTGGTTGATTGGTTCACTGTTGTCTGAACTTTCAATAGGCCCTTCTTGTCTCTATGAGGCCATTAACCAGGTGCCACTCGATGAAGATTCAAACTCTTGCTACATGAGCATTGCAGAAGGGCAATGGTGCAAGAGCAACCCTTTTCTCATGAAGACCCTTCTCTTTTGTTTGGAAACTTTGGAGAAAACTAAAGCTAAAGGGAACCTTTTGGCCATAAGAATGCTGCTTGTAAGTGGCTGGTTTTCCCCCTCTCCCATTTCATCCAGTTTATTAGCCAATGCAGCAAAGAGCATTCCTACAGTGGAAAGCCGTCTCAAGAAGTGGACCAAATCTCTGAGCCTAACAACAAGTTGTTTATCACCACGGACCTGGAAAAATGAAGAAGAATCAGCAATGCTTCTTGTGAAAATGGGACTAGCTAGAAGGGCTAATCAACATGATGGATGTTGGCTTCATTTCCACCCCATAACACAAGCATTTGCCAAAAGAAAAGGTGGTTTGCAATATGCCAAGGCTGCAATTCAAGGAGTGAGGAAAATGGGAAGCCAAGTTAACTCAGATCATTTATGGGCCTCAGCTTTCCTTGTTTTTGGGTTCAAATCTGAGCCTCCCCTGGTGCAGCTGAAGGCAATTGACATGGTTTTGTACATCAAGAGAACAGCTCTTCCTCTAGCAATTCAAGCCTTCACCATTTTCTCAAGATGCAACTCATCCTTGGAGCTCTTGAGGGTGTGCACCAATGCTCTTGAGGAAGTTGAGAAGTCTTTTGTGTCTCAAATCCAAGATTGGTCTTCCCATGGTTCAGTTTGTTGGAAAAGGAGGCTGCAAAGAGGCCAAAAAGTAGATGAATATGTATGGCAGGATGTGACCTTGTTGAAGGCAACACTGCTGGAGACAAGAGCAAAGTTGCTAGCAAGAGGGGGCCATCTAGACAGTGCCAAGGAACTATGCAGAACATGCATCAGTATCAGAACTGTGATGCTTGGCCATAACCATGCACAGACCTTGGCTGCTCAAGACACATTGGCAAGGTTGGTCAGAATGAGGAGCAAGATATGA 2967 0.4408 MESEREDNNNGTDSTHAAISSTLKIKIVSCSKSGESLDNSNLPSPNINNGIESSPYGSPLVSPPSSAFVSALQSPYISPRAIIPDPPNGSPLENQPPLLTITTSTTNPSTPEDVPSSSYTPPSDQYEFSDDTADTRLKYVTCVPEPAPPRISFSFPVPRISFAKGPISPATNAKLRSCDVYIGFHGQNPNLVRFCRWLKSELELQGIDCMLADRAKYSDSQSHEIADGVICSVAFGVVVVTSSSFLNHFSMEEVRFFAQKKNLIPVLFDTGPAEIMALLNCKSIDKECKEAIDGLMKCNEFNIEANDGNWRSCIAKAAGILRARLGRKNAEQKDNVQGHENLPFPRNTYFVGREKEIMEIEGLFFGRGNCMEQVQDHCRVFTKGEASGSGQSEGLADEESEPVIARCGRYISLEMGRSKEPTLEAWVEPIMGNNSLKRLKNKKSKSGSYKSVCSSVICINGVSGIGKSELALEFAHRYHQRYKMVLWVGGEARYLRQNLLNLSLNLGLDVGADSEMERGRIRSFEDQEFEAFKRVKRELFGETPYLLIIDNLETEVEWWEGKDLYDLIPRNTGGTHVIVTTRLSKVMSYDTIQLPPLPLSDAMILMIGRKRKEYSADEIDLLEKINEKLGRLSIGLWLIGSLLSELSIGPSCLYEAINQVPLDEDSNSCYMSIAEGQWCKSNPFLMKTLLFCLETLEKTKAKGNLLAIRMLLVSGWFSPSPISSSLLANAAKSIPTVESRLKKWTKSLSLTTSCLSPRTWKNEEESAMLLVKMGLARRANQHDGCWLHFHPITQAFAKRKGGLQYAKAAIQGVRKMGSQVNSDHLWASAFLVFGFKSEPPLVQLKAIDMVLYIKRTALPLAIQAFTIFSRCNSSLELLRVCTNALEEVEKSFVSQIQDWSSHGSVCWKRRLQRGQKVDEYVWQDVTLLKATLLETRAKLLARGGHLDSAKELCRTCISIRTVMLGHNHAQTLAAQDTLARLVRMRSKI* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2686 988 PANTHER DNA REPAIR PROTEIN RADA 19 988 - -
Vra5g2686 988 Gene3D - 432 593 IPR027417 -
Vra5g2686 988 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 19 988 - -
Vra5g2686 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 660 IPR027417 -
Vra5g2686 988 SMART AAA_5 453 611 IPR003593 -
Vra5g2686 988 Gene3D - 163 293 IPR035897 -
Vra5g2686 988 SUPERFAMILY Toll/Interleukin receptor TIR domain 177 276 IPR035897 -
Vra5g2686 988 MobiDBLite consensus disorder prediction 94 126 - -
Vra5g2686 988 MobiDBLite consensus disorder prediction 33 64 - -
Vra5g2686 988 MobiDBLite consensus disorder prediction 80 126 - -
Vra5g2686 988 Pfam NB-ARC domain 437 588 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2686 Vra-Chr5 33568537 33571773 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2686 - - gmx:100780810 1709.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2686 5 33568537 33571773 Vra5g2686 5 33568537 33571773 ECH