Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2663 ATGGCCAACTTTGAGATTCTTCTTCTCCTTGTTCTCTGCACCCTCCAGAGTTGCTTCGCTGCCTCCAACCCCACCAACTTCATAAAATCCTCCTGCAGCGCCACCCAGTACCCCGCCCTCTGCGTGGAGTCGCTCTCGGTGTACGCCGCCGCCATCCAGCAGGACCCACACCAGCTCGTCCAGACGGCTCTCTCCCTGGCCCTCAACCGAACCGAGTCTACCAAAACCTTCGTGGCCAAGTGCAACAAGTTCAGGGGTCTCAAGCCACGGGAGTACGCCGCCCTCAAAGACTGCGCGGAGGAAATCAGCGACAGCGTCGACCGCCTCTCTCGGTCGTTGAAGGAGCTGAAGCTCTGCAAGGGGAACGGTCAGGACTTCGCCTGGCACATCAGCAACGTGGAGACGTGGGTGAGCTCTGCGCTCACCGACGAGAGCACGTGCGGCGACGGCTTCGCCGGAAAGGCGCTCAGCGGCAAGATCAAGAACGCCATCAGGGGCAGAATGGTGAATGTTGCTCAGGTCACCAGCAATGCCCTCTCTCTCATCAACCAGTATGCTGCCAAACACTAA 570 0.5947 MANFEILLLLVLCTLQSCFAASNPTNFIKSSCSATQYPALCVESLSVYAAAIQQDPHQLVQTALSLALNRTESTKTFVAKCNKFRGLKPREYAALKDCAEEISDSVDRLSRSLKELKLCKGNGQDFAWHISNVETWVSSALTDESTCGDGFAGKALSGKIKNAIRGRMVNVAQVTSNALSLINQYAAKH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2663 189 CDD PMEI-like_3 30 187 - -
Vra5g2663 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 189 - -
Vra5g2663 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 185 IPR006501 GO:0004857
Vra5g2663 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
Vra5g2663 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 185 IPR035513 -
Vra5g2663 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 189 - -
Vra5g2663 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Vra5g2663 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 185 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2663 Vra-Chr5 33314160 33314830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2663 28 182 Carbohydrate Esterase AT3G14310 30.128 2.25e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2663 - - gmx:100305900 310.071