Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2662 ATGGCTTTCTTCCAAATTCTAACCATTGTTACATTCATTCTTGTAACGAGTTCATCATCAGCTTGTGAAAATTCTACCATCTCCACCAACTTCAGCCAAACCAAGATAAATAGCAGTCCATCAACTTCCACACAAAGCTTCAAAAACTACATCAAAACCTCTTGCAACTCAACCACATATCCATCAATATGCTACAGCAGTTTATCCCCATATGCTGCAAAAATTGAAGCAGATCCTACGAAGCTGTGCAGTGTGTCTCTCTCCCTGGCATATAAGGCAGCAAAAAGTGCATCCAGCAGCATATCAAAGATTCTGAAGAAAAACAACATGACAGGGATTGCCGAGCAAGTGGTGCAAGATTGCTTTGGCAATGTGAAGGACTCCATTGGTGAGCTCAAAGATTCCCTTGATTCGTTGGCCCATATGGATGGTGCTGACAGAAAGTTTCAGATCAGCAACATAAAGACATGGGTGAGTGCTTCCATCACCAATGATCAAACTTGCTCAGATGGGTTTGATGAGATGAATGTGGATTCAACTTTGACAGAAAAAATCAGAAAGCTTGTTTTGGATGTGGCAAGGAAGAGCAGCAATGCTTTGTATTTCATCAACAACAATTTGTACTGA 627 0.4099 MAFFQILTIVTFILVTSSSSACENSTISTNFSQTKINSSPSTSTQSFKNYIKTSCNSTTYPSICYSSLSPYAAKIEADPTKLCSVSLSLAYKAAKSASSSISKILKKNNMTGIAEQVVQDCFGNVKDSIGELKDSLDSLAHMDGADRKFQISNIKTWVSASITNDQTCSDGFDEMNVDSTLTEKIRKLVLDVARKSSNALYFINNNLY* 209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2662 208 SMART PMEI_2 46 202 IPR006501 GO:0004857
Vra5g2662 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 206 - -
Vra5g2662 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 205 IPR035513 -
Vra5g2662 208 CDD PMEI-like_3 53 205 - -
Vra5g2662 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 206 IPR035513 -
Vra5g2662 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 205 IPR006501 GO:0004857
Vra5g2662 208 Pfam Plant invertase/pectin methylesterase inhibitor 50 200 IPR006501 GO:0004857
Vra5g2662 208 PANTHER PECTINESTERASE INHIBITOR 4 6 206 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra5g2662 Vra-Chr5 33295947 33296651 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2662 51 205 Carbohydrate Esterase AT1G53830 28.481 3.25e-14 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2662 - - gmx:100527443 292.737