Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2629 ATGGCCTCCGAGAAGAAACTGTCCAATCCCATGCGAGAAATCAAAGTGCAGAAACTCGTCCTCAACATCTCCGTCGGTGAGAGCGGTGATCGTCTCACTCGCGCTGCCAAGGTGCTCGAACAACTCAGTGGCCAAACTCCTGTTTTCTCCAAAGCAAGGTACACTGTGCGTTCCTTTGGGATTAGAAGAAACGAGAAGATCGCATGCTATGTGACCGTGAGGGGTGACAAGGCGATGCAGCTTTTGGAAAGTGGTTTGAAGGTCAAGGAGTACGAGCTCCTGAGGAAAAACTTCAGCGACACTGGCTGCTTCGGCTTCGGCATTCAGGAGCACATTGATTTGGGAATCAAGTATGATCCTTCTACTGGTATTTATGGAATGGATTTCTTTGTTGTTCTGGAGCGCCCTGGATATCGTGTGGGACGTCGTCGTCGTTGCAAGTCACGTGTTGGAATCCAGCACCGAGTGACAAAGGAGGATGCCATGAAGTGGTTCCAAGTTAAATATGAAGGTGTCATCCTAAACAAGTCCCAAAACATTGTTTAG 546 0.4872 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIV* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2629 181 Pfam Ribosomal protein L5 9 62 IPR031310 -
Vra5g2629 181 SUPERFAMILY RL5-like 8 173 IPR022803 -
Vra5g2629 181 Pfam ribosomal L5P family C-terminus 66 164 IPR031309 -
Vra5g2629 181 Gene3D - 2 177 IPR022803 -
Vra5g2629 181 ProSitePatterns Ribosomal protein L5 signature. 39 55 IPR020929 GO:0003735|GO:0005840|GO:0006412
Vra5g2629 181 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 180 IPR002132 GO:0003735|GO:0005840|GO:0006412
Vra5g2629 181 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 172 IPR002132 GO:0003735|GO:0005840|GO:0006412
Vra5g2629 181 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 180 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2629 1 181 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 95.028 8.03e-130 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2629 K02868 - cit:102625025 340.502