Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2604 ATGAGCTGCCATGAAGCACACCAAAGGGCTGCAAAACCTGTTTGCTCTGTTTGCAATAACAGAAGACCACAGTTTGAAAGGAACAGAAAAAAAGAGTTCTCATATGCTGAGTTGTGTGCAGCCACACAAGGGTTTTCCCCTAAGAACTATATATCAGAAGGAGGGTTTGGTTCTGTCTATAAAGGGGAGTTGTCTGGACAAAAGATTGCTGTCAAGCAACACACGTACGCTAACCAAAAGGGAGAGAAGGAATTCAAGTCTGAAGTTGATGTTCTCAGCAAAGCAATGCATGAGAATGTGGTCAGGCTGTTAGGATCATGCTCAGAAGGGATTAATAGACTTCTTGTGTATGAATATGTCTGCAATGCTTCATTGGACCAACATTTATCTCAACATTCTCGTACACTTCTTGATTGGCCAGACAGGGTGAAAGTAGCTGATGGTGCTGCCAAAGGACTGCTATACCTGCATGAGAATAACATAATACACAGAGATCTGACGACAAACAACATTCTTCTTACACATGATTATAATGCATTGCTAGGCGATTTTGGTTTGGCTAGAACTGTGATTGAAGACTCCTCATACTCTACAGAATGTGTTGGGAATACGGGTTATATGGCACCAGAATATGCAGAATTTGGTAAAGTGTCAATAAAAACAGATGTGTATTCCTTTGGGGTGGTTCTACTACAGTTAATAACTGGAATGAGGGCCATAGACAAACGACTTGGGGCTAGAAGTCTGGTGGAATGGGCAAAACCACTTTTAAAAGAGAGGAACTATGCACATTTAATTGATGAAAGAATCATTATATCTCATGATGTCCGTCAACTATTTTGGATGGTTCGAATAGCTGAGAAATGTCTAAGCAGAGACCCTCAAAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACCGACATTGTGGAAGGCAGAGCTGTCAGGAAATTCAGCAGAATTTCTCTTAATCAGATTTGTGAGAAAAATATAAATACGGAACAATGA 1011 0.4036 MSCHEAHQRAAKPVCSVCNNRRPQFERNRKKEFSYAELCAATQGFSPKNYISEGGFGSVYKGELSGQKIAVKQHTYANQKGEKEFKSEVDVLSKAMHENVVRLLGSCSEGINRLLVYEYVCNASLDQHLSQHSRTLLDWPDRVKVADGAAKGLLYLHENNIIHRDLTTNNILLTHDYNALLGDFGLARTVIEDSSYSTECVGNTGYMAPEYAEFGKVSIKTDVYSFGVVLLQLITGMRAIDKRLGARSLVEWAKPLLKERNYAHLIDERIIISHDVRQLFWMVRIAEKCLSRDPQRRLNMIQVVDALTDIVEGRAVRKFSRISLNQICEKNINTEQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2604 336 ProSiteProfiles Protein kinase domain profile. 45 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2604 336 SUPERFAMILY Protein kinase-like (PK-like) 24 307 IPR011009 -
Vra5g2604 336 Gene3D Transferase(Phosphotransferase) domain 1 121 329 - -
Vra5g2604 336 PIRSF ILK 10 323 - -
Vra5g2604 336 Pfam Protein tyrosine and serine/threonine kinase 49 306 IPR001245 GO:0004672|GO:0006468
Vra5g2604 336 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Vra5g2604 336 PANTHER TYROSINE KINASE FAMILY PROTEIN 9 316 - -
Vra5g2604 336 ProSitePatterns Tyrosine protein kinases specific active-site signature. 161 173 IPR008266 GO:0004672|GO:0006468
Vra5g2604 336 PANTHER OS01G0253100 PROTEIN 9 316 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2604 Vra-Chr5 32858191 32860017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2604 28 336 Trihelix Transcription Factor Family AT5G38560 43.789 5.60e-81 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Vra5g2604 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2604 - - vra:106760630 677.167