Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2595 ATGATGTATTCGCCTGTCTTCAACATTCTCCGCCGTATCCTCCGGTTTGTCAAAGAACCGGACCGGATCATGTCCGGCATGTCCGACTGCATGACCGTGTCTGACCCAACAGCTCCTATCGGACCTTCCGTACCAGCTTCCGACGCCATCATCCATCGCACCTCTTCTTCATCTAATGCATACGATGTATTTGTCAGCTTCCGTGGTGAAGACACGCGCAACAACTTCACTAGTTTTCTCTTTGGAGCTCTCCATCGACAAGGCATTCTTGCCTTCAAAGATGACCAATGTATCAAAAAAGGTGATTTCATAGCACCCGAGCTTCTACAAGCCATTCGGGACTCTCAAGTTTTTGTTGTTGTCTTATCAAAGAACTATGCTTCTTCCACTTGGTGCTTGCGTGAACTGGTAGAGATACTTAATTGCTCTGAAACTTCAGCAAGACCTCTTATACCTATCTTTTATGATGTTGAGCCTACGACGGTGCGCAATCAGAAAGGATGTTATGAGAAAGCATTTGCAGAACACGAAAATAGATTCAGAGAAGATAAGGTGAAGATGGAGGAAGTTCAAAGATGGAAAGAAGCTCTCAGAAAAGTGGCCGATATCTCTGGTTCGGAAATCGGAAATAAGTCACAGAATGAACAGATTGAAAAAATTGTTCAAGAGATAATAAATAATTTGAGACCAAAAATTTTAAATTTTCCAAGGGATGAACTAGTTGGGATAGAGGATCGAGTTCAAGACTTAGGAAATATTTTGCGTTTCGACCTTCGTAACGATGTTCGAGTTGTCGGAATAAGTGGGATGGGTGGTATAGGAAAGACAACTCTTGCTCGGGCTTTATATGAAAGAATTTGTCATCAATATAATTATCGTTGTTTTATTGATGATGTAAGCAAAATATTTGTAGATTCTCGTTCGTTGGGCTTACAAAAGCAATTAATTTCTCAGACTCTAAATGAGAAAAATGTAGAGATTTGCAATGTTATCGAGGGAACATGTTTGGTGCAGTCCAAACTGAACAATGCTAAGACACTTATAGTTTTTGACAACGTTGATCAAGTTCAACAACTGAGGATATTTAGCGGAAATAGAGACAATTTGTTGCGAGAATGCTTAGGTAAAGGGAGCAGAATCATCATAGTTTCTAGGGATGAACAAATATTGAAGATACATGGAGTGGATGATATTTATCAAGTTCGACCGTTGATACGAGAAGATGCTATCCAACTATTTTGTAGAAATGCTTTCAAAGATAATTATATTTTGAGCGATTATGAAAAGTTGGCAGATGAAATACTATCACATGTTGAAGGGCATCCCTTGGCAATTGAAACAATTGGGTCATCTTTGCTTGGCCGAAGTTTGTCACAATGGAAAAGTGTATTGGAAGGGCTAAAAGAAAATAAAAGTAAAAATATTATGGATATTTTGCGCATAAGTTATATTCAACTGGAAGAAAAATACAAACAAACATTTTTGGATATTGCTTGCTTCTTCAATTTTTATCACGAAGAACATTTGAAGGAAATTCTAAATTTCCGTGGATTTCATCCTGAAGATAGCATACAAGTTCTCATTGATAAATCACTCATTACCAGACATGGGAGGTCCATAGGTATGCATAGCTTGTTAGTGGATTTGGGAAGGTGTATTGTTCGGGAAGTATCACCTAAAGAGCCTATAAAGTGGAGTAGGTTGTGGACATGCAAAGATCTCCATGATGCTATGTCAGAGAACGAGGTAACTCGAAACCTTGAGGCAATAGTTCTTGAGGATGATGTTACAGATTATGAAACAATCAAGGCGGATGGTCTATCAAAAATTAAACACCTGAAATTGCTTTATGTTGGGTACGTGAAGTTTTCGGGAAGTCTGAGTCATCTTTCGAATGAACTAGGATATCTTGTTTGGAGGAGATATCCGTTTGAGTGTTTGCCTCAAAGTTTTCAGCCACACAAACTAGTTGACTTAATACTCTATGGGAGCAGTATTCAACGACTGTGGGAAGGCACAAAGCCTTTACCCAATTTGAAGCGTTTGGATCTCTCCTTTTGCGAAAGTTTAGTTGAGATGCCAGATGTAGCAGAGGCCCTAAATCTTGAATGGATAATTCTTTTAGGATGCATACAGCTCCAAAAACTCACTCCATCTATTGGGAGTTTGAGAAAGCTTGTTGGTTTGATTTTGAGAGACTGCAAAAAACTAGTAATCTTATCCAATACTATATTGGGACTGAATTCTCTTAAATATCTGGATGTAAGTGGTTGTTCAATAATAGATAGTAAATGCTTACAAGATGAAACAAGGAACACAGAGTACTTGATCAGCTGTTTGTCGCCCTCCTCTCCTCTTTCTTGTTTGTGTGAACTCGATCTAAGCTTCTGTAACTTAGCTCAAATTCCTGATTACATTGGAAAGTTAAGTTCCTTAGAGAAGCTAAATTTAAAGGGAAACAATTTTGTTACATTGCCTAATCTCAAGGACCTTTGGAGACTGTATTATTTAAACTTACAGGATTGCAAGCAATTGAAATACTTGCCCGATCTTCCTTCAGGAAGTGTCTTGTCCTCAAAACTTTCCTCGTCGAGATTCCTCCTATCTTCAATATTTGAATCGCGTTATTTTCTTAATAAGGAAGAAGGTATATATTTTTGGAATGTAGGACTAAATATATTCGGGTGCCCAGAATTAGTTGAGATTGAAGAGTGCATTAGAAAGAGTTTTTCATGGACAATTCAAATTATTCAGGCCACCTACCAATTGCCATTCCCTATAACTCATATGCCTGATAGTATTATGCCTGGAAGTCAAATACCGAATTTGTTCAACAATGAGTTTGTGAACGTGGACATACAATACCTGGACAAAGAAAACCTGGACGAAAAATACCTAACCGTTGATCTACCTCCCGTTCCACATGACAATAATTTCATTGGTGTTCTGTGTTGCGTAATATTTCGTCTAGACCATGAAGAAATTCCAATGGATTTTAGAACAGATCACATGTGGTTACATTATCAAGACGTTTCTATGAACGCACGTGGTATTAATCGTTTTCGTTTCAGTTTGAGCAGGATTACGACATTGTTGGATTACCATAGTTTTTTTGTTACTGTGGATGTGAAGAAATTTCAGTATCGCTGGGTAAATGAACAAGACCTGATTAACTTCAAAATGACGCANTGTGCAAATTTGACAGCTCGGAAGCGCAAGATTTCCGTAATTGAGGAAAACGGCTAG 3246 0.3823 MMYSPVFNILRRILRFVKEPDRIMSGMSDCMTVSDPTAPIGPSVPASDAIIHRTSSSSNAYDVFVSFRGEDTRNNFTSFLFGALHRQGILAFKDDQCIKKGDFIAPELLQAIRDSQVFVVVLSKNYASSTWCLRELVEILNCSETSARPLIPIFYDVEPTTVRNQKGCYEKAFAEHENRFREDKVKMEEVQRWKEALRKVADISGSEIGNKSQNEQIEKIVQEIINNLRPKILNFPRDELVGIEDRVQDLGNILRFDLRNDVRVVGISGMGGIGKTTLARALYERICHQYNYRCFIDDVSKIFVDSRSLGLQKQLISQTLNEKNVEICNVIEGTCLVQSKLNNAKTLIVFDNVDQVQQLRIFSGNRDNLLRECLGKGSRIIIVSRDEQILKIHGVDDIYQVRPLIREDAIQLFCRNAFKDNYILSDYEKLADEILSHVEGHPLAIETIGSSLLGRSLSQWKSVLEGLKENKSKNIMDILRISYIQLEEKYKQTFLDIACFFNFYHEEHLKEILNFRGFHPEDSIQVLIDKSLITRHGRSIGMHSLLVDLGRCIVREVSPKEPIKWSRLWTCKDLHDAMSENEVTRNLEAIVLEDDVTDYETIKADGLSKIKHLKLLYVGYVKFSGSLSHLSNELGYLVWRRYPFECLPQSFQPHKLVDLILYGSSIQRLWEGTKPLPNLKRLDLSFCESLVEMPDVAEALNLEWIILLGCIQLQKLTPSIGSLRKLVGLILRDCKKLVILSNTILGLNSLKYLDVSGCSIIDSKCLQDETRNTEYLISCLSPSSPLSCLCELDLSFCNLAQIPDYIGKLSSLEKLNLKGNNFVTLPNLKDLWRLYYLNLQDCKQLKYLPDLPSGSVLSSKLSSSRFLLSSIFESRYFLNKEEGIYFWNVGLNIFGCPELVEIEECIRKSFSWTIQIIQATYQLPFPITHMPDSIMPGSQIPNLFNNEFVNVDIQYLDKENLDEKYLTVDLPPVPHDNNFIGVLCCVIFRLDHEEIPMDFRTDHMWLHYQDVSMNARGINRFRFSLSRITTLLDYHSFFVTVDVKKFQYRWVNEQDLINFKMTXCANLTARKRKISVIEENG* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2595 1081 Gene3D Ribonuclease Inhibitor 772 880 IPR032675 -
Vra5g2595 1081 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 58 834 - -
Vra5g2595 1081 SMART till_3 60 203 IPR000157 GO:0007165
Vra5g2595 1081 ProSiteProfiles Leucine-rich repeat profile. 811 832 IPR001611 GO:0005515
Vra5g2595 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 834 IPR044974 GO:0006952
Vra5g2595 1081 Gene3D - 58 233 IPR035897 -
Vra5g2595 1081 SUPERFAMILY L domain-like 598 903 - -
Vra5g2595 1081 Pfam TIR domain 60 231 IPR000157 GO:0007165
Vra5g2595 1081 PRINTS Disease resistance protein signature 264 279 - -
Vra5g2595 1081 PRINTS Disease resistance protein signature 340 354 - -
Vra5g2595 1081 PRINTS Disease resistance protein signature 438 452 - -
Vra5g2595 1081 PRINTS Disease resistance protein signature 674 690 - -
Vra5g2595 1081 Gene3D - 234 396 IPR027417 -
Vra5g2595 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 497 IPR027417 -
Vra5g2595 1081 SUPERFAMILY "Winged helix" DNA-binding domain 474 576 IPR036390 -
Vra5g2595 1081 Gene3D - 404 487 IPR042197 -
Vra5g2595 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 52 205 IPR035897 -
Vra5g2595 1081 Pfam NB-ARC domain 259 475 IPR002182 GO:0043531
Vra5g2595 1081 ProSiteProfiles TIR domain profile. 59 228 IPR000157 GO:0007165
Vra5g2595 1081 Gene3D Ribonuclease Inhibitor 584 771 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2595 Vra-Chr5 32758991 32764369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2595 56 850 WRKY Transcription Factor Family AT4G12020 28.293 3.75e-67 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2595 - - vra:106760531 1617.44