Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2583 ATGAACAATCCCAACACCGACAGCTTCTCTCTGTTGGGTGTTTTTCATTCTCCCCACTTCTCTGAACTTCTCAGGGATTTCGCCACGCGAGAACTCAACGCGTTTTTATGGCTATCTCTTGTGGTTGTCACCACCCTTTTGCTCAGAAGACTCTTTAGCCTATTTGGGATATGGCGCAGGGCTAGAACCATTCCCGGGCCTCCCTCTTCCTCTTTTTTTGGCGGCTGCAAGCTCTTTTCCCGGCCAAATTTCACCTTCACTGACGTGCTGTCAGAATGTCATAAAAATTATGGACCTATTGTTAAACTGTGGTTAGGTCCTACTCAGCTTTTGGTGTCAGTAAGGGATCCAATCTTAATCCAAGACATGCTTATAAAAGCCGAGGATAAGTTGCCTTACACGGGAAAACTGTTTCATCTGGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAATTATTGGCAACAGAGTTAAACGAAAGATTGCTGAAGAATGGTGATATGATTCCTGTGAAAGTTGCAGACTTTATCACAGATAAAATAGAAAACATTAAAAAGAAAGGAGGTATTGATTCCAGGTTGGTTTCTCAACATATCGCTTTCACTATAATGGGAGTCACATTCTTTGGAGATGGCTTCTTGGCCTCGCCGAAGGCTGCAATGTATGAGGAACTGTTCATGACCATTGCTAAAGATGCTTGCTTTTGGGCCTCCTATAATGTTACTCCTTTCTGGAGACGTGGATTTTGGAAGTACCAATGCTTATGTACAAAGTTGAAATGCTTAACTCAAGACATCCTTCAACATTGCAGAAAAGGCTGTAAACTATCTAGCCATACTAAGCATGATGTACATAATGAAAGTTCCAATAAAGAAATGAAGTCAGCAGATGGTGCAAAATGCTGTTCTGATGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTTAAGGATCATCGAGATGGTAAAGAAGAATCTTGTGGGAATGTAATGCGCATGATATTTCACGGATGTCAAACTACCTCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATGGGGAAATACAGGATAAGGTTTATTCGGAGATTAGAATGGTAGGAAGAAACCCATCGAAATGTGAGCATGAAGATGTTTATCGGATGCCGTTATTATTGGCTACAATTTATGAATCTGCACGCCTTCTTCCCACTGGTTCCATGCTGCAGAGATGTTCTTTGAAACATGACTTGAGCTTTGCATCTGGTGTAACCATTCCTGCTGGAGCTGTATTGGTTGTACCAGTTGAATTGGTACAGAAGGATGAATTCAATTGGGGGAGTGATGCAAGTCATTTCAATCCTTACAGATTTCTCTCAACTGTTACAAATAGATCAGGTTCTGCTGAAGACCTTTCTAGTACAGGATTCAGTTCATTTGTACTAAATGATCCAAATGAAAATGCAGCATTCTTGCCTTTTGGATCAGGTGCACGGGCTTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCAGTGTTGGCATCATTGCTAAATAAATATGAGATACGGCTTAGCTCAGACTCAAATGATGACTCAAACACAACCTTGAAGAATAATCTTCTGCAGCGTCATCCCAGTTCACAGATATTATTCATGAAAAGGGACCAGTGA 1686 0.4128 MNNPNTDSFSLLGVFHSPHFSELLRDFATRELNAFLWLSLVVVTTLLLRRLFSLFGIWRRARTIPGPPSSSFFGGCKLFSRPNFTFTDVLSECHKNYGPIVKLWLGPTQLLVSVRDPILIQDMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELLATELNERLLKNGDMIPVKVADFITDKIENIKKKGGIDSRLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRRGFWKYQCLCTKLKCLTQDILQHCRKGCKLSSHTKHDVHNESSNKEMKSADGAKCCSDDEFQDYYFFRDLKDHRDGKEESCGNVMRMIFHGCQTTSVLITDVLTRLVMHGEIQDKVYSEIRMVGRNPSKCEHEDVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFASGVTIPAGAVLVVPVELVQKDEFNWGSDASHFNPYRFLSTVTNRSGSAEDLSSTGFSSFVLNDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSSDSNDDSNTTLKNNLLQRHPSSQILFMKRDQ* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2583 561 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506|GO:0016705
Vra5g2583 561 SUPERFAMILY Cytochrome P450 64 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PANTHER CYTOCHROME P450 FAMILY 4 36 548 - -
Vra5g2583 561 PANTHER CYTOCHROME P450 4C3-RELATED 36 548 - -
Vra5g2583 561 Pfam Cytochrome P450 65 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 Gene3D Cytochrome P450 53 561 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2583 561 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2583 Vra-Chr5 32653281 32658591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2583 32 526 Cytochrome P450 AT1G13710 23.828 1.05e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2583 - - gmx:100809563 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2583 5 32653281 32658591 Vra5g2583 5 32653281 32658591 ECH