Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2582 ATGGCCACTCAAAGGCTTAGATATTGTGCAAACTTCCTTGAGAACTCCAAACACCACTTTGCCATGATTGCTCTGCAATTTGGCTATGCCGGCATGAACATCATCACCAAGGTTTCCCTCAACCGTGGAATGAGCCATTATGTTCTTGTCGTTTATCGCCATGCCTTTGCCACTGCTGTCATAGTTCCATTTGCCTTCATCTTTGAAAGGAAAGCTCAACCAAGGATCACATTCCGAATTTTCATGCAAATTTTCATCCTTGCTCTGCTTGGGCCTGTGATTGATCAAAACTTCTACTATGCTGGATTGAAATTAACTTCTCCAACTTTCTCCTGTGCAATGAGTAATGTGCTTCCAGCCATGACTTTTATAATGGCAGTTTTATGCAGGATGGAGAAGTTGAACATGAAGAAGGTGAGGTGCCAAGCAAAGGTGGTGGGAACATTGGTGACTGTGGGTGGAGCCATGGTGATGACCTTGTACAAAGGACCTCTGGTGGAAATGGTTTGGACCAAACATGCCCTTAATCAGAACCAAACCAATAATGCAACAACAAATAATGGAACAACACCTTCAGACAAAGATTGGCTCATAGGCTCCATTCTCCTAATCATTGCCACACTTGCTTGGGCATCCCTCTTTGTTTTACAAGCCAAAGCTATTGAAACCTACAAAAATCACCAGCTAAGCCTGACATCACTGATATGCTTCTTAGGCACTATTCAAGCTATTGCTGTTACTTTTGTTATGGAACACGATCCATCAGTGTGGACTATTGGGTGGGATATGAACTTGCTTGCTGCTGCATATGCTGGGATTGTTACATCAAGCATATCATACTATGTTCAAGGGTTGGTGATTAAGAAGAAAGGGCCTGTTTTTGCAACTGCATTCAGCCCTCTCATGATGATCATTGTAGCCATAATGGGTTCCTTTATCCTTGCAGAACACATTTTTCTTGGAGGTGTGGTTGGTGCGATCTTGATCGTTATAGGGTTATATTCAGTTCTATGGGGAAAGCACAAAGAAGAAGTGGAAAATAAAGTGGTGGAGGATATTCCCTTGCCTTTAAAGGGTGCAATGCTTCAATCAAATAATCCAGATTCCAACAACATCTCTTCACTTGTCATTAATGTCACCACTGAACCTCCATTCAAATCTAACAGTTAA 1170 0.4205 MATQRLRYCANFLENSKHHFAMIALQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIVPFAFIFERKAQPRITFRIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFIMAVLCRMEKLNMKKVRCQAKVVGTLVTVGGAMVMTLYKGPLVEMVWTKHALNQNQTNNATTNNGTTPSDKDWLIGSILLIIATLAWASLFVLQAKAIETYKNHQLSLTSLICFLGTIQAIAVTFVMEHDPSVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEHIFLGGVVGAILIVIGLYSVLWGKHKEEVENKVVEDIPLPLKGAMLQSNNPDSNNISSLVINVTTEPPFKSNS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2582 389 PANTHER WAT1-RELATED PROTEIN 14 372 - -
Vra5g2582 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 342 - -
Vra5g2582 389 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020|GO:0016021
Vra5g2582 389 Pfam EamA-like transporter family 198 337 IPR000620 GO:0016020|GO:0016021
Vra5g2582 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 161 - -
Vra5g2582 389 PANTHER WAT1-RELATED PROTEIN 14 372 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2582 Vra-Chr5 32641745 32644880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2582 1 379 Nodulin-like Gene Family AT5G07050 68.205 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2582 - - gmx:100804359 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2582 5 32641745 32644880 Vra5g2582 5 32641745 32644880 ECH