LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g2579	ATGGAATCGCCACAGCCAGGTTCAAGAGGAGCAGAAGCTCTTAAACACGTAGTTCCTGGTTCATCTATTGCTGTTAAATATCACCCACTTTTTGGACCTCATGATGACCTCATCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCAATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTATACCACCAGCGAATCATTCAGAATTTTGTGAAAATCCACAAAACAATGATAGTAATAAGGAAGAAGAGAAAGTTGTTGCACCTGTAATCAAAGTTGTATCTGGTAATATTGAGCTTGTCGAGGCAGCCCCCAGACTTGATAAACTTAAGTCTTTTCTATTAGAAAAGACTTACAATTTTGATGAATATGATATGGAAAATTTAGAAGACAACCAGGAATCTACAATAGGATTATATAGCTGGAATGATCTTGTAGACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCTGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTCTTGGAATGCTTTTGAAAAATTCGGTGATAAATGATTGGTCACTCAATGCTTTAAACGAAGATGAAGTTGTCAGTACACTGGTATCAGATGGATTTCCTGGGGTGCTAGCAAGGCATTGTTTGCGTACATATGGCACCAAAGTAAATGAAGGCATGCCTGGCTGTGCCTGGAAATTGGACGAGAAGCGAGTATGTATACATTTTGCAAGAGAAATCCTGAAAGGGGGTAAAAGGAAGTTAGAGAGTTTCTTGGATGAATGGAGGCAGAAGGTTCCAGATGGAATGCAGCCCACTGTTGATCTTGTGGAAGGAGAGGTATTAATAGAGAGAGTTGGAGTTGAGACATGGGTTCGTGCCTTCAGCGTTGCATCTTTGCCTTCAACTCCGGCTGAGCGTTTTGCCATTCTTTTCAGAGAGAGGACAAAATGGGAATGGAAAGATCTGCAGCCATATGTCAGAGATCTGAAGATACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGGACACAACCATCACCTGATGCGGAACCAATTTTCAGCGCAAGATAG	1188	0.415	MESPQPGSRGAEALKHVVPGSSIAVKYHPLFGPHDDLILLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLIPPANHSEFCENPQNNDSNKEEEKVVAPVIKVVSGNIELVEAAPRLDKLKSFLLEKTYNFDEYDMENLEDNQESTIGLYSWNDLVDNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVINDWSLNALNEDEVVSTLVSDGFPGVLARHCLRTYGTKVNEGMPGCAWKLDEKRVCIHFAREILKGGKRKLESFLDEWRQKVPDGMQPTVDLVEGEVLIERVGVETWVRAFSVASLPSTPAERFAILFRERTKWEWKDLQPYVRDLKIPGLSSEGLLLKYTRRTQPSPDAEPIFSAR*	396

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g2579	395	Pfam	Sister chromatid cohesion protein Dcc1	39	361	IPR019128	GO:0007064\|GO:0031390
	Vra5g2579	395	PANTHER	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	19	395	IPR019128	GO:0007064\|GO:0031390

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra5g2579	10	395	C3H Transcription Factor Family	AT2G44580	56.378	1.02e-161	457

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g2579	K11271		-	gmx:100807595	664.84