Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2578 ATGGTGCAGCAAAAGAAGCTAGTTGATGAAGTCTCCGGTTGGCTCAGAATCTACGATGACGGTTCGGTCGACCGGACATGGACCGGACCGGCTCAGTTCAAGTTTTTGGCTGATCCGGTTCCTTCTCATGAAAAATTTATAGATGGTATCGCTGTTCGTGATACCATCGTTTCTCATGAAGGCCATGACCTCCGTGTTCGATTATACTTGCCGGAGAAAGCGTTGGAAAATAAAAAAAAATTACCCATCATTCTTCATTTTCAGGGTGGTGGGTTTTGCATCAGTGAACCGGACTGGTTCATGTACTACCAAATTTACGTTCGAATTGCCCTTTCAACTCAGGCAATTGTGGTTTCTCCTTTCCTCCGCCGTGCACCGGAGCACCGTCTCCCGACCGCCATTGATGACGCCTTTGACACCCTCCTCTGGCTCCGATCTGTGGCCCGGTCCGGTTCGCGTGAACCGTGGCTCGAGCAACATGGGGATTTCAACCGGGTTTTTCTCATAGGGGACAGTTCTGGCGGGAACGTGGTGCATGAGGTGGCTTCAAGGGCCGGTTCGGTGGACCTAAGCCCGGTTCGGGTTGCAGGAGCGATCCCGGTTCACCCCGGGTTTGTCCGGTCGGAGCGGAGCCGGTCCGAGCTGGAAATGCCGCAATCACCGTTTTTAACGTTGGACATGCTCGACAAGTTCCTAGAGTTAGCACTGCCTGTCGGGGCGACGAAGGACCACCCAATAACGTGCCCGATGGGAGCGGCGGCACCGCCGCTTGAAGGGCTGAAACTGCCGGCGGTGCTGCTGTGCGTGGCGGAGATGGACTTGGTGAGGGACACGGAGATGGAGTACTACGAGGCCATGAAGAAAGGCAACAAGGACGTTGAACTTTATGTGAGCCATGGAATGAGTCATAGTTTTTACTTGAACAAGGTTGCTGTGGACATGGACCCCAATGTTAGTGCAAAAACCGATGCTTTCATAACTAGGATCAAGGAGTTCATTCAGGAGCACTGA 1011 0.5302 MVQQKKLVDEVSGWLRIYDDGSVDRTWTGPAQFKFLADPVPSHEKFIDGIAVRDTIVSHEGHDLRVRLYLPEKALENKKKLPIILHFQGGGFCISEPDWFMYYQIYVRIALSTQAIVVSPFLRRAPEHRLPTAIDDAFDTLLWLRSVARSGSREPWLEQHGDFNRVFLIGDSSGGNVVHEVASRAGSVDLSPVRVAGAIPVHPGFVRSERSRSELEMPQSPFLTLDMLDKFLELALPVGATKDHPITCPMGAAAPPLEGLKLPAVLLCVAEMDLVRDTEMEYYEAMKKGNKDVELYVSHGMSHSFYLNKVAVDMDPNVSAKTDAFITRIKEFIQEH* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2578 336 Gene3D alpha/beta hydrolase 15 336 IPR029058 -
Vra5g2578 336 PANTHER CELL DEATH ASSOCIATED PROTEIN 3 334 - -
Vra5g2578 336 Pfam alpha/beta hydrolase fold 84 306 IPR013094 GO:0016787
Vra5g2578 336 SUPERFAMILY alpha/beta-Hydrolases 7 336 IPR029058 -
Vra5g2578 336 PANTHER ARYLACETAMIDE DEACETYLASE 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2578 Vra-Chr5 32587097 32588552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2578 7 326 Carbohydrate Esterase AT1G68620 32.722 4.49e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2578 - - gmx:100806530 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2578 5 32587097 32588552 Vra5g2578 5 32587097 32588552 ECH