Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra5g2561 | ATGGGTTCAAATGCAGCAGAAGAAGAGTCTACCTTGATCGCCATTGATAGCGATCAGAACAGCCAACATGCAGTCAAATGGGCTGTGGAATATCTCTTCAAGAACAACTCTTCCTGCACCCTCCTTCACGTCAGAACTAAGAACTTATATCACAATGATTTGGAGGTTTTCCCTAAGCAAGGTCGCCCACCAACAGAAGAAGAATTGCAACAGATTTTTCTTCCCTTTCGAGGATTTTGTGCTCGAAAAAGGGTCGCAGTTAAAGAGTTAGTTCTGCAAGACACTGACGTAGCAAATGCGCTTACTAATTACATAATTCTGAACTCTATCAACAATGTTGTTGTTGGTGCTTCTCGCTCCAAAGCTCTTCTAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTGGTAAGATCTTTGCCTCAATCTTGCATGGTGCATATCATATCAAAAAGAAAAGTGCAGAGTATTCGACCAGCAGGTCATTCTCATCAGAATATTAGTATCGCACCATCAAAATCTCTAAAAGCCATCAGGGAAAGTTTTCGGTCCAAAGATTTAAACAGAAGATCGCTCCAAATTAAATTTTGGCAAAGCTCAAACAATGATGGGGTATCTCTAATGACACCACACAAGAACAATGGAGAGACTGATTCTGCAAAACTATCTGATGAAACCAGTTCTTTACAAACTTCATCCAATCAAAGTTTCTTTAAAGAAGACACTTCAAGGTTGTTTGATAATCAAACCAGTGAGACATCACATGGAAACCAAAACGTTGTCATTAATTCGAATTGTAGGAGCAAATCTTCCAAAAAGTCTCCGACAAAGAAGCATGAAAATATTAGGCAAGAAGAGGGAGACATGCATGAAGAAGAAGAACAAGAAGAGAGGAAAAAACCATCAAATGAAATTGCACCAAACAAAGTTCTATTTAAAAGATACAACATTAAAGAAATAGAAGTAGCAACTAATTACTTTGACAATGCCCTGAAAATCGGTGAAGGTTCATATGGACCTGTTTTCAAAGGGGTGCTTGATAACATTGATGTTGCTGTCAAGGCTCTGAGACCTGACATAACTCAAGGGGAGAAGCAGTTTCAACAAGAGGTTATTGTTTTGAGCACAATAAGACATTCAAACATGGTTAAACTTTTGGGTGCATGTCCGGAGTATGGATGCCTTGTGTATGAGTACATGGAAAATGGAAGTTTAGAAGATCGTCTATTCCAAAAAGATAACACACCAGTAATTCCATGGAAAGTTAGATTCAAAATAGCATCAGAAATTGCCACAGGCCTTCTTTTCCTTCATCAGACAAAGCCTGAGCCTATTGTGCACCGAGACCTGAAACCTGCAAATATTTTGTTAGACTGTAACTATAGTAGCAAGATCACTGATGTGGGTTTGGCAAGGCTAGTTCCACCTGCCATACCGAACAAAAGCACTCAATACCATAAGACAACTGCAGCTGGTACATTTTGCTACATTGATCCAGAATATCAGCAAACAGGACTATTGGGAGTTAAATCAGACATTTATTCACTAGGTGTAGTGCTATTGCAAATTATAACTGGAAAGGCTCCTATGGGTGTGGCTCACTTAGTTCAAGAGGCTATAGAAAAAGGTACATTTTCTGAGGTTCTTGATCCTAATGTCATGGATTGGCCTGTTGAGGACACTTTGTCATTTGCTAAGTTGGCTTTGAAGTGTTGTGAGATGAGAAAACGAGATAGACCAGATCTTGCTTCTGTGATTTTGCCAGAATTGACTCGGCTTGCAAATTTAGGAGTAGCGATTACATTTCCCAAAGACAAAATCATGGTGTAA | 1830 | 0.3918 | MGSNAAEEESTLIAIDSDQNSQHAVKWAVEYLFKNNSSCTLLHVRTKNLYHNDLEVFPKQGRPPTEEELQQIFLPFRGFCARKRVAVKELVLQDTDVANALTNYIILNSINNVVVGASRSKALLRKFKDVDVPTSLVRSLPQSCMVHIISKRKVQSIRPAGHSHQNISIAPSKSLKAIRESFRSKDLNRRSLQIKFWQSSNNDGVSLMTPHKNNGETDSAKLSDETSSLQTSSNQSFFKEDTSRLFDNQTSETSHGNQNVVINSNCRSKSSKKSPTKKHENIRQEEGDMHEEEEQEERKKPSNEIAPNKVLFKRYNIKEIEVATNYFDNALKIGEGSYGPVFKGVLDNIDVAVKALRPDITQGEKQFQQEVIVLSTIRHSNMVKLLGACPEYGCLVYEYMENGSLEDRLFQKDNTPVIPWKVRFKIASEIATGLLFLHQTKPEPIVHRDLKPANILLDCNYSSKITDVGLARLVPPAIPNKSTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVVLLQIITGKAPMGVAHLVQEAIEKGTFSEVLDPNVMDWPVEDTLSFAKLALKCCEMRKRDRPDLASVILPELTRLANLGVAITFPKDKIMV* | 610 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra5g2561 | 609 | SMART | serkin_6 | 327 | 591 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g2561 | 609 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 10 | 266 | - | - | |
Vra5g2561 | 609 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 283 | 599 | - | - | |
Vra5g2561 | 609 | SUPERFAMILY | Protein kinase-like (PK-like) | 304 | 586 | IPR011009 | - | |
Vra5g2561 | 609 | Pfam | Protein kinase domain | 331 | 584 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g2561 | 609 | PANTHER | OS02G0152300 PROTEIN | 10 | 266 | - | - | |
Vra5g2561 | 609 | PANTHER | OS02G0152300 PROTEIN | 283 | 599 | - | - | |
Vra5g2561 | 609 | CDD | STK_N | 13 | 151 | - | - | |
Vra5g2561 | 609 | Gene3D | Transferase(Phosphotransferase) domain 1 | 400 | 597 | - | - | |
Vra5g2561 | 609 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 12 | 127 | - | - | |
Vra5g2561 | 609 | Gene3D | HUPs | 10 | 149 | IPR014729 | - | |
Vra5g2561 | 609 | MobiDBLite | consensus disorder prediction | 202 | 270 | - | - | |
Vra5g2561 | 609 | MobiDBLite | consensus disorder prediction | 275 | 303 | - | - | |
Vra5g2561 | 609 | ProSiteProfiles | Protein kinase domain profile. | 327 | 590 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra5g2561 | 609 | Pfam | Universal stress protein family | 12 | 146 | IPR006016 | - | |
Vra5g2561 | 609 | Gene3D | Phosphorylase Kinase; domain 1 | 294 | 399 | - | - | |
Vra5g2561 | 609 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 445 | 457 | IPR008271 | GO:0004672|GO:0006468 | |
Vra5g2561 | 609 | MobiDBLite | consensus disorder prediction | 202 | 303 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra5g2561 | Vra-Chr5 | 32389683 | 32392770 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra5g2561 | 280 | 597 | Receptor kinase-like Gene Family | AT5G12000 | 65.094 | 3.35e-153 | 452 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Vra5g2561 | Pkinase | 8.8e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra5g2561 | - | - | vra:106760620 | 1171.76 |