Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2560 ATGGCGTACNAGACCCCTGATAGAGATTCTGAATCGGATCCGAAGACANCAACGCGTCTCTATAATCCCTACAAGGACCTTGAAGTCCCCATTCGCAACCTCTACCAGCTCCCGACTTCCCCCGAGTATCTCTTCGTCGAGGAGGCTCGCCGCAAGCGTCGATCCTGGGGCGAGAACCTCACCTTCTACACAGGATGTGGCTACCTTGCCGGCGCCGTCGGCGGTGCCGCCTCCGGCCTCGTCGAAGGCGTAAAGTCCTTCGAGTCCGGTGATACCGCTAAGCTCCGCATCAACCGCGTCCTCAACTCCTCCGGTCATGCTGGGCGAGCCTGGGGCAACCGCCTAGGCGTCATTGGCCTGCTATACGCCGGCATCGAGAGCGGGATCGAGGCGGCGAGGGACACCGACGACGTCTGGAACAGCGTCGCGGCTGGACTGGGCACTGGCGCGTTGTATCGTGCCGCGAGAGGGGTGCGGTCGGCGGCGGTGGCGGGGGCCGTTGGCGGCGTCGTGGTTGGAGTTGCTGTTACCGCGAAGCAGGCATTGAAACGCTACGTGCCTATTTGA 567 0.6261 MAYXTPDRDSESDPKTXTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAASGLVEGVKSFESGDTAKLRINRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIEAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2560 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
Vra5g2560 188 PANTHER TIM23 8 188 IPR045238 GO:0022857
Vra5g2560 188 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 8 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2560 Vra-Chr5 32385224 32387639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2560 10 188 Chloroplast and Mitochondria Gene Families AT1G72750 69.231 2.22e-79 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2560 K17794 - gmx:100777112 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2560 5 32385224 32387639 Vra9g0290 9 2245376 2246351 PCT