Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2503 ATGAAAGGATACTTTCTACTTGTGATTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCGTGCCCAGAATCCATCAGGATTCGTCAGCATTGACTGCGGACTTGTGGATGAACCAAGCTATACAGATGAAACTACTGGCATCTATTACTCTTCGGATGTCAACTTCACAGACGGTGGTGTAAGCCACAGCATATCATCTACATATAAGCCTTCCCTTACAAGACAGTTCTGGAATGTTAGAAGCTTTCCCGATGGAACCAGGCACTGCTATACCCTGGTTTCTCAAGGAAGTGGCAATAAATATTTGGTGAGGGCAAGGTTTGTATATGGAAGTTACGACGGAAAAGAATCTCTTCCTGAATTTGACATTTATATCGGAGACAAATGGTGGGGATCAGTGGTGTTTGAGGATGCATCCAGTGTAGTCACCAAGGAAATCATATATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTATTCAACACTGGCAAGGGTACACCTTTTATTTCAGTTTTAGAGATTAGAGTTCTTAACAGTGATGCCTACCTAGTCACCTATGGGGAGCTCTTGGCAAGGTTTGATGCAGGCTTACAAGATGGTGAAATAGTCAGATTTCCAGATGATGTCTATGATAGAATATGGACACCTTATAACTCAGCTGACTGGAATCAGATAGATACCCTCCTTACCATAGACCAAGGTGCTACTTCATTTAACTTTTTACCATTGCCACCCTCCACTGTCATGGGAACTGCAGCAATTCCAGCAAATGTTAACGACGGTATAGAGCTACGCTTCGTTCCCGTGTACAATTCTTCCACACTTTATGTGTACATGTTTTTTGCTGAAATCCAGAAGCTTGAGGCAAACCAAACTAGAGAGTTCAACATTTTTGTAAATGGGAACATTTTAAATATTGATCCAATCAATCTTCCGTACCTGCAGAGTGAGTATTATATGGCTATAAGCGAAAATTCGTTGGAACTTTCGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTCTCAACGCCATTGAGATATATACGTCAAGAAACTTCTCACAATCAGAAACAAAGCAGAAAGACGTTGATGGTATCACAAATGTCAAGTCAATGTATGGAATCAAGAGAAACTGGCAAGCAGATCCTTGTACTCCACTGACCTACTTATGGGACGGTCTTAACTGCAGCTATGCTGAATCTGCTTCAGCAAAGATTGTATACTTGAACTTATCTTCCAGTGGTTTAATTGGTAATATAGCTTCTGGCATATCCAATCTGCAGTACATAGAATATTTGGATTTGTCAAACAACAACTTGACCGGGACCGTGCCTGATTTCCTACATCAACTACGCTTCTTAAGAGTTCTAAACCTAGAAAACAATCAGCTATCAGGAACAATTCCAACGCAACTCATTCAACTTTCCCAGAATGGTTCACTTGAATCCAATTTTGGTGGAAATCCAGATCTTTGCACACAAGGTTCATGCAACAATAATAATGGGAACAGGGTTGTAGTTCCACTGGTGGCATCTCTGGGAGGAGCTTTTCTGATACTAATAATAGCAGTGATTTCTTTCTGCATACACAAAAGGAGACAACTAGCTCTCCGGAGAAAACAGATGGCCTATTCCAGAATAAAGGAGGAACTAGAGTCTAATAAACAAGAATTCACCTATGCTGAAGTCCTGACAATGACCAAAAATTTAGAAAGAGTTGTAGGGAAAGGAGGATTTGCAACAGTCTACTATGGCCGGATAGATGATACTGAGGTAGCTGTCAAAATGCTCTCTCCTTCAGCCCAAGGGTATATGCAATTTAAGGCAGAGGCCAAATTCGTTGCTGTAGTTCATCATAAATTTTTAACTTCTCTAATAGGATATTGTGATGATGGCGAGAAAATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTCTCAAAACATTTATCAGGCAAAAGCAAAAATATATTGAGTTGGAACCAACGACTTCAAATTGCAGTGGATGCTGCAGAAGGATTGGAGTATTTGCACCATGGCTGCAATGCGCCAATTGTTCACAGAGATGTTAAGACTCAGAACATCTTGGTGAATGAAAATTTGAGGGGTAAACTAGCTGATTTTGGGTTGTCAAAGATCTATCCTAATGAAAGTGACACCCATATGGTCACAGTGGTAGCTGGCACCCTTGGATATCTTGATCCAGAGTACCATAGATCAAACAGGTTGAAGGCAAAAAGTGATGTTTTCAGTTTTGGAGTAGTACTGCTTGAGATAATCACAGGTCAACCTGCTATAACCAAATCTGAAGAGAAAATTTACATAATTCAATGGGTTGATTCTGAGCTACTTGAAAAGGAGATCAAAGATATTGTAGATTCAAGATTGCAGGGAGAATTTGACATTGATTCTGTAAAGAAGGTTTTAGACATTGCAATGGCTTGTGTAGCACCCATTTCCATTAACAGGCCAACCATGAGTCATGTAGTTCAGGAACTGAAACAATGTTTGTCAAACGAGAATACTCCCCCCTTTAACTCTGACAATCTTAAGAGTTCATCCAACAGCTCAGTCACTGTTTCCTTTGATGGAATTAGTGGACTGAGCTCTCTAGTGAGATAG 2631 0.3991 MKGYFLLVIFQLSLILPIIVRAQNPSGFVSIDCGLVDEPSYTDETTGIYYSSDVNFTDGGVSHSISSTYKPSLTRQFWNVRSFPDGTRHCYTLVSQGSGNKYLVRARFVYGSYDGKESLPEFDIYIGDKWWGSVVFEDASSVVTKEIIYAASSDYVHVCLFNTGKGTPFISVLEIRVLNSDAYLVTYGELLARFDAGLQDGEIVRFPDDVYDRIWTPYNSADWNQIDTLLTIDQGATSFNFLPLPPSTVMGTAAIPANVNDGIELRFVPVYNSSTLYVYMFFAEIQKLEANQTREFNIFVNGNILNIDPINLPYLQSEYYMAISENSLELSINKTSRSTLPPLLNAIEIYTSRNFSQSETKQKDVDGITNVKSMYGIKRNWQADPCTPLTYLWDGLNCSYAESASAKIVYLNLSSSGLIGNIASGISNLQYIEYLDLSNNNLTGTVPDFLHQLRFLRVLNLENNQLSGTIPTQLIQLSQNGSLESNFGGNPDLCTQGSCNNNNGNRVVVPLVASLGGAFLILIIAVISFCIHKRRQLALRRKQMAYSRIKEELESNKQEFTYAEVLTMTKNLERVVGKGGFATVYYGRIDDTEVAVKMLSPSAQGYMQFKAEAKFVAVVHHKFLTSLIGYCDDGEKMALIYEYMANGDFSKHLSGKSKNILSWNQRLQIAVDAAEGLEYLHHGCNAPIVHRDVKTQNILVNENLRGKLADFGLSKIYPNESDTHMVTVVAGTLGYLDPEYHRSNRLKAKSDVFSFGVVLLEIITGQPAITKSEEKIYIIQWVDSELLEKEIKDIVDSRLQGEFDIDSVKKVLDIAMACVAPISINRPTMSHVVQELKQCLSNENTPPFNSDNLKSSSNSSVTVSFDGISGLSSLVR* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2503 876 SMART serkin_6 570 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2503 876 ProSiteProfiles Protein kinase domain profile. 570 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2503 876 Gene3D Transferase(Phosphotransferase) domain 1 644 861 - -
Vra5g2503 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Vra5g2503 876 PANTHER OS07G0107800 PROTEIN-RELATED 10 876 - -
Vra5g2503 876 Pfam Malectin-like domain 31 351 IPR024788 -
Vra5g2503 876 Pfam Protein tyrosine and serine/threonine kinase 572 836 IPR001245 GO:0004672|GO:0006468
Vra5g2503 876 SUPERFAMILY Protein kinase-like (PK-like) 554 836 IPR011009 -
Vra5g2503 876 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 876 - -
Vra5g2503 876 Gene3D Phosphorylase Kinase; domain 1 552 643 - -
Vra5g2503 876 SUPERFAMILY L domain-like 388 483 - -
Vra5g2503 876 Gene3D Ribonuclease Inhibitor 367 491 IPR032675 -
Vra5g2503 876 Pfam Leucine rich repeat 410 466 IPR001611 GO:0005515
Vra5g2503 876 CDD STKc_IRAK 576 838 - -
Vra5g2503 876 Coils Coil 539 559 - -
Vra5g2503 876 ProSitePatterns Protein kinases ATP-binding region signature. 576 597 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2503 Vra-Chr5 31990947 31995676 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2503 4 841 Receptor kinase-like Gene Family AT2G19210 46.838 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra5g2503 Malectin_like 4.1e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2503 - - pvu:PHAVU_005G162000g 1483.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2503 5 31990947 31995676 Vra5g2503 5 31990947 31995676 ECH