Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2496 ATGTGGATTACTTTCTACGTTGCTGTTTCAGCTGTTCTATTTATTCAACTTCATGCTCAACCAGAATTCATCAGCATAAATTGTGGATCTCAAGAAGGTTATACTGACCCGTTACTAATAAATTACGTTTCGGATGCGGATTTCATAAATACTGGTGTGAGTGGGACAATATCATCTGAAGAGAACAGCAGATACAATACTCAACGACAACTATGGACGCTGAGAAGCTTCCCGGAAGGAAGAAGGAACTGTTACAAAATAAATGTCACAAGAGCCTCTAAGTATCTCATCCGCACTACTTTTCTGTACGGAAATTATGATGGCCGAAATATATTACCACAGTTTGATCTTCTTATCGGACCTAACCCCTGGGGTACAGTCACTATATTCAATGCAGCATTTTCTCAATTCAAGGAGATCATACATGTACCTTCAATGGATTATGTGCAAATCTGTCTGGTTCACACAGGCAATGGCATACCATTTATAACAGCCATAGAATTCAGGACTTTGAAATATGATGCATACGTTATTCCATTCGGATCAATGCAACTTTACAATTACCTGCGCTGCGATTTGGGTTCACACACAAGCTACAGGTACCCGGTTGATGTTTATGATCGTGTCTGGTATGCTCGTTCTCACTGGTCCGCTTGTAATTTCGGTGAAAATTGGAAATCACTAAGTTCCTCCAATCCTGATAATTTTTTGAATCAGAATGGTTACAAGCCAGGAGAGATCATGAGCACCGCAGTTGAACCAGAAAACGATAGTGCTCCGTTGGTAATAAGCTGGGAGCCACAAAATGAAACTGACCAATTCTATGTGTATATGTACTTCACGGAAATTCAAGTGTTAACCAAGAATCAGACAAGACAATTCAACATTATGCTGAACGCTGAATCATTACTTCAAAATTTTTCTCCGCGTTACCAAATTGCCGATACCATAAATGCGACGACAGCCATCAGTGGGAAAGAAATTAAATTTTCCCTCGAGAGGACTGAAAATTCAACCCTCCCTCCCATCATCAGTGCCATTGAAATTTACAGAGTAATAGACTCACAGAACCCAGAAACATTCCAAGGAGATGTTGATGCAATTACCAGCATTAAGTCTGCCTATGGAATGGAATGGGATTGGGAAGGTGATCCATGTGCCCCTGCAGCCTACTTGTGGGATGGTCTCAACTGTACTTATCTCGGCAATGAGTTTCCAAGAATCACAGCTTTGAATTTATCTTCGAGTGGATTGTCAGGAAAGATTGACTCTTCTATCTCAAACCTCACCATGTTGGAGAAGCTGGATTTATCTAACAATAACTTAAATGGTGAAGTTCCTGATTTTCTGTCTCAATTACAACACTTAAAGACCTTAAAGTTGGAAAAGAATTTCCTCTCCGGTTCAATTCCCTCTGCTCTTGTTGAAAAATCACGCGAAGGTTCTCTCTCACTAAGTGTCGATCAAAACCTATATACATGTGAATCTGGCCAATGCAACGAGAAGAAAAAGAAAAACACTGCTACACGTACAGCCATAGTAGCCTCGACCAGTGGGGTTTCATTTATTCTAATAGCCGTTGGAATATTGTGGATCTTTAAAAGGAAACAATCAAAAGTTGAAAAATTTACAGATTCGGTGGCAGTAAATCATCAGATTGAGATTTCACAGCAATCCACAGAAAAGGATAATTCGTTCCAGCAAGGCACAAGTCAAAAGTATTCATACTATGATGTCCTTCAAATCACTAACAATTTGAATAGAATTATTGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATCGATGAGACTCCAGTTGCAGTGAAAATGCTTTCCCCATCAGCAGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTAATCAGAGTTCACCACAAAAATTTGATATCCCTTATTGGTTACTGTAACGAAGGAACCAATAAGGGCCTTATATATGAATACATGGCTAAAGGCAACTTACGAGAACATCTCTCAGGTAAACACAACGAATCACCATTCTTGAGCTGGAAGGACAGACTTCGTGTAGCAGTGGATGCAGCCGTAGGATTGGAATATCTGCATAATGGTTGCAAGTCTCCTATAATCCATAGAGATGTAAAATCTTCAAACATCTTGTTGGATGAACACTTCCAAGCAAAGTTATCTGATTTTGGTCTTTCGAAAGTTTTCCCAGAAGATGGGAGATCTCATGTGTCAACTATTGTTGCTGGTACACTTGGTTATCTGGACCCTCACTACCACTCTTCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATTACAAATCAATCAGTAATGGCAGGAAATGAAGAAACGGGTCACATAAGTGAACGAGTTAACTCCATGATACCAAAAGGAGATATCAGGGCCATAGTTGACTCAAGCTTAGAAGGAAATTTTGATATTAAGTCGGCATGGAAAGCGGTAAAAATAGCATTGGTCTGTGTTTCTCCAAATCCCAACGAAAGGCCAATGATGAATGTGGTAGTGAGTGAACTACAGGAGGCTTTAGCGACCGAAGTAGCTAGAACAAACCATGACAGTGGTGCTGATACTAGGTATTCAGTTGCACCGGTCAGCGAGAATGTAGACAGCGAAATCATGCCGTCGGCTAGGTAA 2679 0.3994 MWITFYVAVSAVLFIQLHAQPEFISINCGSQEGYTDPLLINYVSDADFINTGVSGTISSEENSRYNTQRQLWTLRSFPEGRRNCYKINVTRASKYLIRTTFLYGNYDGRNILPQFDLLIGPNPWGTVTIFNAAFSQFKEIIHVPSMDYVQICLVHTGNGIPFITAIEFRTLKYDAYVIPFGSMQLYNYLRCDLGSHTSYRYPVDVYDRVWYARSHWSACNFGENWKSLSSSNPDNFLNQNGYKPGEIMSTAVEPENDSAPLVISWEPQNETDQFYVYMYFTEIQVLTKNQTRQFNIMLNAESLLQNFSPRYQIADTINATTAISGKEIKFSLERTENSTLPPIISAIEIYRVIDSQNPETFQGDVDAITSIKSAYGMEWDWEGDPCAPAAYLWDGLNCTYLGNEFPRITALNLSSSGLSGKIDSSISNLTMLEKLDLSNNNLNGEVPDFLSQLQHLKTLKLEKNFLSGSIPSALVEKSREGSLSLSVDQNLYTCESGQCNEKKKKNTATRTAIVASTSGVSFILIAVGILWIFKRKQSKVEKFTDSVAVNHQIEISQQSTEKDNSFQQGTSQKYSYYDVLQITNNLNRIIGKGGFGTVYLGFIDETPVAVKMLSPSAVHGYQQFQAEVKLLIRVHHKNLISLIGYCNEGTNKGLIYEYMAKGNLREHLSGKHNESPFLSWKDRLRVAVDAAVGLEYLHNGCKSPIIHRDVKSSNILLDEHFQAKLSDFGLSKVFPEDGRSHVSTIVAGTLGYLDPHYHSSNRLTQKSDVYSFGVVLLEIITNQSVMAGNEETGHISERVNSMIPKGDIRAIVDSSLEGNFDIKSAWKAVKIALVCVSPNPNERPMMNVVVSELQEALATEVARTNHDSGADTRYSVAPVSENVDSEIMPSAR* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2496 892 ProSitePatterns Protein kinases ATP-binding region signature. 590 611 IPR017441 GO:0005524
Vra5g2496 892 Pfam Malectin-like domain 26 352 IPR024788 -
Vra5g2496 892 ProSiteProfiles Protein kinase domain profile. 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2496 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Vra5g2496 892 Gene3D Transferase(Phosphotransferase) domain 1 659 877 - -
Vra5g2496 892 CDD STKc_IRAK 590 855 - -
Vra5g2496 892 PANTHER OS07G0107800 PROTEIN-RELATED 12 891 - -
Vra5g2496 892 SUPERFAMILY L domain-like 392 476 - -
Vra5g2496 892 Gene3D - 188 353 - -
Vra5g2496 892 PANTHER PUTATIVE-RELATED 12 891 - -
Vra5g2496 892 SMART serkin_6 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2496 892 Gene3D Ribonuclease Inhibitor 365 486 IPR032675 -
Vra5g2496 892 Pfam Protein tyrosine and serine/threonine kinase 586 853 IPR001245 GO:0004672|GO:0006468
Vra5g2496 892 Gene3D Phosphorylase Kinase; domain 1 555 658 - -
Vra5g2496 892 SUPERFAMILY Protein kinase-like (PK-like) 567 853 IPR011009 -
Vra5g2496 892 MobiDBLite consensus disorder prediction 863 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2496 Vra-Chr5 31922332 31927467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2496 10 892 Receptor kinase-like Gene Family AT1G51800 47.111 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra5g2496 Malectin_like 9.1e-100 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2496 - - gmx:100779102 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2496 5 31922332 31927467 Vra5g2496 5 31922332 31927467 ECH