Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2495 ATACTGGTAATAAGGTGGGAGCCAAAAGATGAAACTGAGAAATTCTATGTGTACATGCACTTCAAGGAGATCCAACTGCTAACAAGCGATCAAAGAAGACAATTCAAAATCACGATGAACGGTGAATTAAGAGTTCAAAATTTTTCTCCACAGTACCAAGGTGTGGATACTATATATACGACGGAAGCCACCAATGGGAAAGAAATTAAATATTCCCTGGAGAGGACTGAAAATTCAACCCTGCCTCCCATCATCAATGCTATTGAAATTTACAAAGTAATAAACTTACAGAAACCAGAAACGTTCCAAGGAGATGTTGATGCAATTACAAGCATTAAGTCTGCCTATGGAGTGAAAAGGGTTTGGGAAGGTGATCCATGTGCTCCTGCAGCCTACTTGTGGGATGGTCTCAACTGTACTTATCTCGGCAATGAGTTCCCAAGAATCACAGCTTTGAATTTATCGTCAAGTGGATTGTCAGGAAAGATTGACCCTTCCATCTCAAAACTCACCATGTTGGAGAAGCTGGATTTATCTAACAATAACTTAAATGGTGAAGTTCCTGATTTTCTGTCTCAGTTACCATACTTGAAGATCCTAAACTTGGAGAAGAATAACCTCTCCGGTTCGATTTCCTCTGTACTTGTTGGAAAATCACACCAAGGTTTTCTCTCACTAAGAATGGGTCAAAATCCATATCTATGTGAAACTGATCAATGCAACGACAAGGGAAAGAAAACCACTGTTACACCCATAGTAGCATCAGTTAGTGCGATTTTAATTCTTCTAATAGCCGGTGCAATATTTTGGATCCTTAAAAGGAAAAAATCAAAAGGTAATGCTGAAATAACTACGAAAATAAATCATCTGAGTGAAATTTCTCAGCAATCCACAGAAAAGGATGAATCGTTCATGCAACGGAAAAGTCAAACGTATTCATACTATGATGTCCTTCAAATTACAAACAATTTCAATAGAATTATTGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATAGGTGACACTTCAGTTGCGGTGAAAATGCTTTCCACGTCAGCAGTTCATGGTTACCAACAATTTCAAGCAGAGGTTAGACTTCTAATCAGAGTTCATCACAAAAATTTGACATCACTTATTGGTTACTGTAATGATGGAACCAATAAGGGCCTCATATATGAGTACATGGCTAAAGGGAACTTACGAGAACATCTCTCAGGTAAACACAGCGAATCTCCATTCTTGAGCTGGAAGGACAGACTTCGTGTAGCAGTGGATGCAGCCGTAGGATTGGAATATCTGCATAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTAAAATCATCAAACATCTTGTTGGATGAAAACTTCCAAGCAAAGTTATCTGATTTCGGTCTATCCAAAGTTGTCCCAGATGATGGAAGATCTCATTTGTCAACTATTGTTGCTGGTACACTTGGTTATCTGGACCCTCACTACCATTCTTCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACAAATCAAGCAGTAATGGCAGGGAATGAAGAAACGGGTCACATAAGCGAACGAGTTAACTTGATGATATCAAAAGGGGATATCAGGGCCATAGTTGACTCAAGCTTACAAGGAAATTTTGACATTAACTCTGCATGGAAAGCCGTAGAAATAGCAATGGCTTGTGTTCATCCAAATCCCAACGAAAGGCCAATGATGAGTGTGGTAGTGATTGAACTACAGGAGGCTTTAGCGACCGAATTAACTAGAACAAACCATGATATTGGTGCTGATCCCAGGTATTCAGTTGCACCGGTCAGCGTGAATTTAGACAGCGAATTCATGCCGTCGGCTAGGTAA 1893 0.3941 ILVIRWEPKDETEKFYVYMHFKEIQLLTSDQRRQFKITMNGELRVQNFSPQYQGVDTIYTTEATNGKEIKYSLERTENSTLPPIINAIEIYKVINLQKPETFQGDVDAITSIKSAYGVKRVWEGDPCAPAAYLWDGLNCTYLGNEFPRITALNLSSSGLSGKIDPSISKLTMLEKLDLSNNNLNGEVPDFLSQLPYLKILNLEKNNLSGSISSVLVGKSHQGFLSLRMGQNPYLCETDQCNDKGKKTTVTPIVASVSAILILLIAGAIFWILKRKKSKGNAEITTKINHLSEISQQSTEKDESFMQRKSQTYSYYDVLQITNNFNRIIGKGGFGTVYLGFIGDTSVAVKMLSTSAVHGYQQFQAEVRLLIRVHHKNLTSLIGYCNDGTNKGLIYEYMAKGNLREHLSGKHSESPFLSWKDRLRVAVDAAVGLEYLHNGCKPPIIHRDVKSSNILLDENFQAKLSDFGLSKVVPDDGRSHLSTIVAGTLGYLDPHYHSSNRLTQKSDVYSFGVVLLEIITNQAVMAGNEETGHISERVNLMISKGDIRAIVDSSLQGNFDINSAWKAVEIAMACVHPNPNERPMMSVVVIELQEALATELTRTNHDIGADPRYSVAPVSVNLDSEFMPSAR* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2495 630 CDD STKc_IRAK 328 593 - -
Vra5g2495 630 Pfam Malectin-like domain 4 93 IPR024788 -
Vra5g2495 630 Gene3D - 7 94 - -
Vra5g2495 630 ProSiteProfiles Protein kinase domain profile. 322 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2495 630 Gene3D Transferase(Phosphotransferase) domain 1 397 609 - -
Vra5g2495 630 Gene3D Ribonuclease Inhibitor 107 221 IPR032675 -
Vra5g2495 630 SUPERFAMILY L domain-like 133 218 - -
Vra5g2495 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Vra5g2495 630 ProSitePatterns Protein kinases ATP-binding region signature. 328 349 IPR017441 GO:0005524
Vra5g2495 630 Pfam Protein tyrosine and serine/threonine kinase 324 589 IPR001245 GO:0004672|GO:0006468
Vra5g2495 630 PANTHER PUTATIVE-RELATED 4 610 - -
Vra5g2495 630 PANTHER OS07G0107800 PROTEIN-RELATED 4 610 - -
Vra5g2495 630 Gene3D Phosphorylase Kinase; domain 1 303 396 - -
Vra5g2495 630 SMART serkin_6 322 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2495 630 SUPERFAMILY Protein kinase-like (PK-like) 304 589 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2495 Vra-Chr5 31895317 31898437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2495 2 630 Receptor kinase-like Gene Family AT2G19210 47.881 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra5g2495 PK_Tyr_Ser-Thr 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2495 - - vra:106760603 1241.48