Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2493 ATGGATGGAAAATGGAGATGCCATTGGGCTTGGATCTTCACCTTATGGTGTATCCTTGCATATACCATTTCAGAATTTTCAGGAAAGTCCATTCTGGCCACAGAGAACAACTCTATGCAGCACAAACAAGGAAGAAGGAAACTGGATGATGTCAGTGGTTCTATTTCCATTGACTGTGGGATACCAGAAGAAGTGGCCTACACTGATGAGAAAACTCAGATTCATTACACTTCAGATGCACAGTTTATTGGCACTGGAACAAGAAAAAATATATCCCTCAAGCTCACTTCTGAAATACCCCAAGGAGTTTTCACTACTGTGAGAAGCTTCCCTGAGGATAAAAGAAACTGCTACACTCTACGACATCCAGAAGGCGGAAATACTATTTACTTGATAAGAGCTTCTTTTATGTACGGAAACTATGATGACTTGAACAAGCTGCCACAATTTGATCTCTATGTTGGAGTCAATTTTTGGGACTATGTCAAGTTTGAAAATGCCACTCATGTTGTAATCAAAGAGATTTTACATGTGCCATCTTTGGATGAATTATATATTTGTTTATTGAATACTGATATGGGAACTCCTTTTATATCAGCACTGGAGGTGAGGCACTTTGATCATTCCAGTTATAGAACAGACTCTAAACTCTTATCCCTATATAGACGTTTTGACATTGGATCAACAACCAATGATATAGTGAGATTTGAAGAAGACACTTATGATCGAATGTGGTATCCTTACAACTTACCAGATTCTACACCACTCAGTACTTCCTTGAGCATTGATTCCTTGAACCATACTGCTTATCACCTTCCACCAGCAGTAATGAAAACTGCTTTGAGACCAACAAATGAAAATGATTCCCTGGAATTTGATTTTGACACTGGGCATCCTACTTCAGATTCATATGTCTATATGCACTTTGCTGAAATCGAAGATCTTAAGGAAAACGAAAGCAGGGTATTCGACATTACACTGAATGGACAGATTTTGTCTGAATCTGTTTCTCCCAAGTATTTGCTGTCAAAAACGATAGAAAGTAAACAGGCCATTAGAGGAAGTAAGCTCAAGTTTTCTATGTACAAGAAACCAAATTCCACCCATCCTCCCATTCTAAATGCGATGGAGATTTATGTTGTTAAAGAATTCTTGCAATCACCCACAGATCAAGAAGATGTTAAGGCTATCATGTCCATCAAATCATATTACAAGTCGATGTCGTCGTTGGGTAAATCTTGGCAAGGAGACCCTTGTGCACCGTTGAAATACTCTTGGCATGGTATCAACTGCAGCAATAATGGATATAAATCACCCACAATAACTGCATTAAACCTAGCCTCCAGTGGATTAGATGGCCCGATAATTTATTCTTTTTTGGAGCTCAAATTCTTAGAATTCTTGGATTTATCAAACAATAGCTTAACAGGACCACTGCCTGATTTTTCAAAGCTGCAATACTTAAAAACTCTCAATTTATCAGGGAACAGACTCTCGGGTGAAATTCCTCCACTGCTCTTGGAAAGATCAAATAACGGTTCCCTTATGTTGAGCGTGGATCCGGATCTCTGCCCGATAGGCCCATGTGAAGAGAACAAAAACAATATTGTTCCACTTGTGGCAGGCATTCTTTCAGCTGTAGTCTTTTTCATTGTATTGGGTATTGTGCTGAGTATCATTTGGAGGAGACGCAACAAAAACCCAGCCTCAAAGCAAGCTGTGAGATCAAACGAAGAAGTTGTGCTGAAGACAAATAATAAACAGTTCTCGTACTCTCAGATAATGACTATAACCAATAACTTTGACAAAACAATTGGGAAGGGAGGGTGTGGAATTGTTTATCTTGGTTACTTACAGGATGGCACACAAGCTGCTGTCAAAATGCTCTCGTCTAAATCTCCTCAAGGATCTCAGCAGTTTCAGACAGAGGCTCAACTCTTAATGCGTGTACATCATAAGAACTTAGCTTCCTTTCTTGGATACTGTAATGAAGTCGGACGCACAGCCATCATTTACGAATACATGACTAATGGTAACTTGGAAGAGTATCTTTCAGATCCTAAAAGAGAACCATTGAGTTGGAGACAGAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTATCGAGTACTTGCATCATGGCTGCAAGCCACCAATAGTCCATAGAGACATAAAGACTGCAAACATTTTACTGAATGAGAAAATGCAAGCTAAAGTTGCAGATTTCGGTTTCTCAAAATTTTTCTCAGCTGAAAATGAAAGTTACGTATCAACTGTAGTTATTGGCACTGTTGGATATCTTGATCCAGAATACTACATATCCAGCAGGCTGACTGAAAAAAGCGACGTTTATAGTTTTGGCATTGTACTTTTGGAGCTAATTACTGGTCAGCCAGCCATAATAAAAGGTCATCAGAACACTCACATTGTGCAATGGGTTAACCACTTTCTTGAAAGAGGAGATATACAACAAATTGTTGATCCAAAGATGAAAGGAGATTTTGACTTTGGTTCTATGTGGAAGGCCTTGGAGGCAGCAGTATCTTGTGTGCCTTCAATCTCTATCCAAAGGCCATCAATGAATCACATTGTCGCTGAACTGAAAGAGTCCTTAAAAATGGAAGCAACTCGAGAACAAGAAGGCATCAACTCGATTGAAATGAACGTTGTTGATCTTGAAGCTGATTGGGGCCCAGATGCAAGATAG 2706 0.3943 MDGKWRCHWAWIFTLWCILAYTISEFSGKSILATENNSMQHKQGRRKLDDVSGSISIDCGIPEEVAYTDEKTQIHYTSDAQFIGTGTRKNISLKLTSEIPQGVFTTVRSFPEDKRNCYTLRHPEGGNTIYLIRASFMYGNYDDLNKLPQFDLYVGVNFWDYVKFENATHVVIKEILHVPSLDELYICLLNTDMGTPFISALEVRHFDHSSYRTDSKLLSLYRRFDIGSTTNDIVRFEEDTYDRMWYPYNLPDSTPLSTSLSIDSLNHTAYHLPPAVMKTALRPTNENDSLEFDFDTGHPTSDSYVYMHFAEIEDLKENESRVFDITLNGQILSESVSPKYLLSKTIESKQAIRGSKLKFSMYKKPNSTHPPILNAMEIYVVKEFLQSPTDQEDVKAIMSIKSYYKSMSSLGKSWQGDPCAPLKYSWHGINCSNNGYKSPTITALNLASSGLDGPIIYSFLELKFLEFLDLSNNSLTGPLPDFSKLQYLKTLNLSGNRLSGEIPPLLLERSNNGSLMLSVDPDLCPIGPCEENKNNIVPLVAGILSAVVFFIVLGIVLSIIWRRRNKNPASKQAVRSNEEVVLKTNNKQFSYSQIMTITNNFDKTIGKGGCGIVYLGYLQDGTQAAVKMLSSKSPQGSQQFQTEAQLLMRVHHKNLASFLGYCNEVGRTAIIYEYMTNGNLEEYLSDPKREPLSWRQRIQIAVDAAQGIEYLHHGCKPPIVHRDIKTANILLNEKMQAKVADFGFSKFFSAENESYVSTVVIGTVGYLDPEYYISSRLTEKSDVYSFGIVLLELITGQPAIIKGHQNTHIVQWVNHFLERGDIQQIVDPKMKGDFDFGSMWKALEAAVSCVPSISIQRPSMNHIVAELKESLKMEATREQEGINSIEMNVVDLEADWGPDAR* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2493 901 Pfam Protein tyrosine and serine/threonine kinase 601 814 IPR001245 GO:0004672|GO:0006468
Vra5g2493 901 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Vra5g2493 901 ProSiteProfiles Leucine-rich repeat profile. 464 486 IPR001611 GO:0005515
Vra5g2493 901 ProSiteProfiles Leucine-rich repeat profile. 487 509 IPR001611 GO:0005515
Vra5g2493 901 CDD STKc_IRAK 605 869 - -
Vra5g2493 901 ProSiteProfiles Protein kinase domain profile. 599 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra5g2493 901 SUPERFAMILY L domain-like 393 508 - -
Vra5g2493 901 Gene3D Ribonuclease Inhibitor 390 540 IPR032675 -
Vra5g2493 901 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 23 901 - -
Vra5g2493 901 Pfam Malectin-like domain 57 380 IPR024788 -
Vra5g2493 901 Gene3D Phosphorylase Kinase; domain 1 581 674 - -
Vra5g2493 901 Gene3D Transferase(Phosphotransferase) domain 1 675 894 - -
Vra5g2493 901 PANTHER OS07G0107800 PROTEIN-RELATED 23 901 - -
Vra5g2493 901 SUPERFAMILY Protein kinase-like (PK-like) 579 867 IPR011009 -
Vra5g2493 901 PRINTS Leucine-rich repeat signature 465 478 - -
Vra5g2493 901 PRINTS Leucine-rich repeat signature 485 498 - -
Vra5g2493 901 Gene3D - 222 381 - -
Vra5g2493 901 SMART serkin_6 599 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2493 Vra-Chr5 31881009 31885468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2493 47 901 Receptor kinase-like Gene Family AT2G19210 47.181 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vra5g2493 Malectin_like 4e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2493 - - gmx:100791717 1510.35