Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2492 ATGCACAGCAAAAAGGTTATTGTTAGCCATACAAAGATGAATATCAATAGCACAAAAGGACTTCTTGCACTCTTTGCATTTGTCTTCTTGGGATGGGGTAATGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCAGCCGTGGATGTTGGGAATAATGATTATTTGCCTACCCTTTTCAAGGCAAACTACCTTCCTTATGGAAGGGACTTTGTCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCCACTGATATTACTGCTGAAACGCTGGGTTTCAAGACTTTTGCACCTGCATATCTTAGCCCTCAGGCTTCAGGGAAGAATCTTCTCATTGGAGCAAACTTTGCTTCAGCAGCCTCTGGTTATGATGAAAAAGCTGCTATTTTGAACCATGCGATTCCACTGTCTCAACAGTTAAAATATTTCACGGAATATCAAGGCAAGCTGGCCAAGGTTGCTGGCAGTAAAAAAGCAGCGCTTATTATTAAGGATGCGCTGTACATATTGAGCGCTGGCAGTAGTGATTTTGTTCAAAACTATTACGTCAATCCTATAATCAGCAAAGCCTTCACTCCTGATCAGTATTCTGCATACCTTGTTGGTGCATTTTCCATCTTTGTTAAGGACTTGTATAAATTGGGAGCTAGGAAGGTTGGAGTGACTTCACTCCCACCTCTAGGTTGCCTACCAGCTGCAAGAACTTTGTTTGGTTTCCACGAAAATGGTTGTGTCTCGAAGATCAACAGTGATGCCCAAGGATTTAACAACAAAATCAAGACAGCCGCAGCAAATCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTGATATTTTCAAACCTCTTAATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGCCGAGGCAAGGAAAGGTTGCTGTGGTACTGGAATAGTGGAGACAACATCTTTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCCAGTATGTGTTTTGGGATAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCCGATGCATTGATTTTACAAGGCATTGCCCTTATCACATAA 1098 0.4199 MHSKKVIVSHTKMNINSTKGLLALFAFVFLGWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYLPYGRDFVNHQPTGRFCNGKLATDITAETLGFKTFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYFTEYQGKLAKVAGSKKAALIIKDALYILSAGSSDFVQNYYVNPIISKAFTPDQYSAYLVGAFSIFVKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHENGCVSKINSDAQGFNNKIKTAAANLQKQLPGLKIVVFDIFKPLNDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2492 365 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Vra5g2492 365 SUPERFAMILY SGNH hydrolase 133 356 - -
Vra5g2492 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 14 364 - -
Vra5g2492 365 Pfam GDSL-like Lipase/Acylhydrolase 43 355 IPR001087 GO:0016788
Vra5g2492 365 Gene3D SGNH hydrolase 33 360 IPR036514 -
Vra5g2492 365 PANTHER GDSL ESTERASE/LIPASE EXL3 14 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2492 Vra-Chr5 31878441 31880184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2492 21 357 Pollen Coat Proteome AT1G75910 34.118 4.82e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2492 - - gmx:100795716 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2492 5 31878441 31880184 Vra5g2492 5 31878441 31880184 ECH
Vra5g2492 5 31878441 31880184 Vra9g0204 9 1425925 1427717 PCT