Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2441 ATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCGGCGGGTGTGCATCACCAGCGCCAGTACTCAGATAACTTCCTCGATGGCTCTTCCAATGGCAACAGGTGGCTCCAATCGGCTGGCCTCCAACACCTTCAATCCTCCACCAATCAACTTCCTCCGCTTCAGGACTATAATTTATACGGCGGCGGAGGAGCGCAGGGAGGAAGAATGTACCGGAACGCGCAGAGGAGCTTTAACGGAGGGACTGAGTATTACGTGGAGCCTTCCACTCCTCCTGGTGGTTACCGTGCTTCGATGCAGAAAAAGAACGGCGATGATTTGTCTGGTGATTTCAGCCCCGGCTTGTTGGATCTGCATTCGTTCGATACCGAGCTTCTTCCTCCTGAGATGCCAGCCTCCAATGCATATGATGGAAACTCCCTGTATCAACCTGGCCGAGGGAGAAGCTTTGATGACTCTGAACCTTACATGTTGAGCAAACAGACTGGCAGAGCTCGTGCTCCTGAAAACATATTGAAGAGTTTTCCTGCAGAAAAGGAGAAATCTAATTCTGTAGCAAAGATCAAAGTTGTGGTTCGTAAAAGACCAATGAATAAGAAAGAATTAGCAAAAAATGAGGAAGACATTATAGAAACATATTCCAATTCTTTAACAGTGCACGAGACTAAACTAAAGGTGGACTTAACTCAGTATGTAGAAAAGCATGAATTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTAGAGCCTATAGTTCCAATAATCTTTGAACGCACTAAGGCAACATGCTTTGCATATGGACAAACAGGAAGCGGAAAAACTTACACTATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACAGAAACCAGGGATTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAACTTTTTGATCTTCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGAGTATCAGATGTGGAGAACATCAAAGAACTGATTGAGAAAGGAAATTCCACTAGAAGTACAGGCACCACTGGTGCAAATGAGGAATCGTCACGGTCACATGCAATACTTCAACTTGCTATCAAGAGGTCTGTTGATGGAAATGAATCCAAACCTCCCCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAGCGTGGAGCAGACACCACAGATAATGACAAACAAACAAGAATAGAAGGCGCTGAAATCAATAAGAGCTTACTTGCGCTAAAGGAATGTATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAACTCCCGCACAGTTATGATTTCATGCATATCACCAAGCACTGGTTCATGCGAACATACGCTGAATACATTAAGATATGCTGACAGGGTGAAAAGCTTGTCGAAAGGGAACAATACAAAGAAAGATGCTGTATCATCAAATTTCAACCTTAAAGAATCAAGCACGGTTCCATTATCTTCCATTACTGGATCAGCCTATGAGGATCGCACAACTGATGGATGGCCAGATGAAAATGAAGGGGATGATTTTAGTCCCCCTGAAGAGTATTACGAGCAGGTGAAACCATCTTTGAAGAAAAATGTAAAGATGGAGTCATATGCTACAACTGATGACAAATTGAAGAAACCCAGTGGTCTGATGAAGTGGAAGGACCTCCCAAAAGTTGAGCCTCAAACCACACACGCTGAGGATGATTTAAATGCCCTCTTACAGGAAGAAGAGGACCTAGTAAATGCTCACCGGACACAAGTAGAGGAGACTATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAACTGGATGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCACAATGTTTTGGTTTCATCTACTACCGGTTACTGA 2115 0.434 MNGAGRQGLRSGAAGVHHQRQYSDNFLDGSSNGNRWLQSAGLQHLQSSTNQLPPLQDYNLYGGGGAQGGRMYRNAQRSFNGGTEYYVEPSTPPGGYRASMQKKNGDDLSGDFSPGLLDLHSFDTELLPPEMPASNAYDGNSLYQPGRGRSFDDSEPYMLSKQTGRARAPENILKSFPAEKEKSNSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNTKKDAVSSNFNLKESSTVPLSSITGSAYEDRTTDGWPDENEGDDFSPPEEYYEQVKPSLKKNVKMESYATTDDKLKKPSGLMKWKDLPKVEPQTTHAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTTGY* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2441 704 CDD KISc_KIF2_like 188 509 - -
Vra5g2441 704 PANTHER KINESIN-RELATED PROTEIN 6 1 701 - -
Vra5g2441 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 511 IPR027417 -
Vra5g2441 704 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 701 - -
Vra5g2441 704 MobiDBLite consensus disorder prediction 367 386 - -
Vra5g2441 704 PRINTS Kinesin heavy chain signature 268 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 PRINTS Kinesin heavy chain signature 377 394 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 PRINTS Kinesin heavy chain signature 411 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 PRINTS Kinesin heavy chain signature 461 482 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 MobiDBLite consensus disorder prediction 543 563 - -
Vra5g2441 704 Pfam Kinesin motor domain 194 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 ProSitePatterns Kinesin motor domain signature. 410 421 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra5g2441 704 Gene3D Kinesin motor domain 166 514 IPR036961 -
Vra5g2441 704 ProSiteProfiles Kinesin motor domain profile. 188 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 SMART kinesin_4 186 517 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra5g2441 704 MobiDBLite consensus disorder prediction 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2441 Vra-Chr5 31479499 31484527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2441 188 511 Calmodulin-binding Proteins AT5G65930 33.832 2.71e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2441 K10393 - gmx:100799100 1346.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2441 5 31479499 31484527 Vra5g2441 5 31479499 31484527 ECH