Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2400 ATGAGTATGAGTCATCACAGTGTGGGTGCAGACATGGAAAGCTTGAAAGCACCTTTTAAAGGTGTTAAAAAGGACCTTCGTGGCAGAGCGGTGTTCTATGAAGATGATTGGAGAACTGGTCTTTACTCAGGAATTGGAATCTTGGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCCGTTATTGCCTTTGGCGAGCAGCTAAGTAGAGACACAGATGGAAGCTTGAGCACTGTAGAAACACTGGCTTCTACAGCTATTTGCGGAATCATACACTCTATTTTGGGTGGCCAGCCTCTCTTAATCGTAGGAGTTGCTGAACCCACTATCATTATGTACACCTATTTGTACAACTTTGCCAAAGATAAGGATTCCTTGGGACGAGAACTCTTTTTAGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTATTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAACAGATTTACAAGGATTGCGGGTGAGCTTTTTGGCATGTTGATCACTGTCTTGTTCATTCAAGAGGCTATAAAGGGAATTGTAAGTGAGTTTAATGTTCCTAAAGAGGGAGACCCAACATCGGAAAAGTACCATTTTCATTGGCTGTATGCAAATGGATTGATGGGCATTATATTCACCTTTGGCCTTCTCTATACGTCTTTAAAGAGTAGAAGAGCAAGGTCATGGTTATATGGCACAGGGTGGTTTAGAAGTTTCATTGCAGACTATGGGGTACCTTTCATGGTGGTGGTGTGGACAGCACTATCATTCATAGTACCAAGTAAAGTGCCTTCTGGAGTTCCCAGAAGGCTCACCTCTCCTCTTGTTTGGGAGCCTACATCTTTACATCACTGGACAGTAATCAAAGATATGGGGAAGGTTTCTCCGTCATATATTTTTGCTGCTTTTATTCCTGCCATAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAGATGGCACAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGACTAACGACTTTGCTTTGTGGATTAATTGGCTTACCACCTTCAAATGGAGTTCTTCCTCAATCTCCTATGCATACCAAGAGCCTGGCTGTTCTCAAGAAACAGATGATCCGGAGAAAGATGGTTAAAAGTGCTAAGGAAAGCATAAGTCTTAAAGCTAGTAATTCTGAAATTTATGGAAAAATGCAAGCAGTGTTTATAGAAATGGATGACTGTCCAGATAATCATTTAGTGGACAAAGAACTAGAGGATTTGAAAGAGGTTGTCTTAAACGGTGAAGACAAAGGACATGACAAAAAGAGTAACTTTGATCCTGAAAAACACATTGATGCATATTTGCCTGTGAGAGTAAAGGAGCAGAGAGTGAGCAATCTCTTACAATCAATCTTTGTTGGAGCATCAGTCTTTGGCATGCCTGCCATAAAAAAGATACCAACTTCAGTTCTGTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTTTGGGAAAGGATCTTACTCCTTTTTGTAACACCTAGTAGGTGGCACAAGTTGTTGGAGGGGGATCATGCTTCCTATGTCGAGTCAGTACCTTACAGATACATAGTATTGTTCACACTCTTCCAATGTGTGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTCCTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAGTCTCACCATCTTAGGGAACTGGATGCAGCTGAATACGAAGAAATAATTGCTGCTCCAGGACTAACATTCAATAGGTCTTTCAGGGAGGGAGAATCACCCAGAGTTGGATCAGTGGAAATAGTTGATGCTGAAATATTAGATGAGTTAACTACAAATAGAGGGGAGTTGAAGGTTAGAAATGTCAGCTTTAGTGAGGAAAGAAATCGCCAGGTGTACCCTGATGGAACCGGATCTCCAGAAAAATTGTTAGGGACGAAAGGTGATGAATTGAATCCTACATGA 2073 0.4149 MSMSHHSVGADMESLKAPFKGVKKDLRGRAVFYEDDWRTGLYSGIGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDKDSLGRELFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQEAIKGIVSEFNVPKEGDPTSEKYHFHWLYANGLMGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFIADYGVPFMVVVWTALSFIVPSKVPSGVPRRLTSPLVWEPTSLHHWTVIKDMGKVSPSYIFAAFIPAIMIAGLYFFDHSVASQMAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQMIRRKMVKSAKESISLKASNSEIYGKMQAVFIEMDDCPDNHLVDKELEDLKEVVLNGEDKGHDKKSNFDPEKHIDAYLPVRVKEQRVSNLLQSIFVGASVFGMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWHKLLEGDHASYVESVPYRYIVLFTLFQCVYFLVCFGVTWIPIAGILFPLPFFFLITLRQHILPKLFKSHHLRELDAAEYEEIIAAPGLTFNRSFREGESPRVGSVEIVDAEILDELTTNRGELKVRNVSFSEERNRQVYPDGTGSPEKLLGTKGDELNPT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2400 690 PANTHER ANION EXCHANGE PROTEIN 12 671 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vra5g2400 690 MobiDBLite consensus disorder prediction 664 690 - -
Vra5g2400 690 Pfam HCO3- transporter family 210 386 IPR011531 GO:0006820|GO:0016021
Vra5g2400 690 Pfam HCO3- transporter family 18 191 IPR011531 GO:0006820|GO:0016021
Vra5g2400 690 Pfam HCO3- transporter family 465 555 IPR011531 GO:0006820|GO:0016021
Vra5g2400 690 PANTHER BORON TRANSPORTER 4-RELATED 12 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2400 Vra-Chr5 31117821 31122456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2400 12 670 Antiporters AT1G74810 68.825 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2400 K24194 - gmx:100811184 1186.79