Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2358 ATGGCTTCCGAGAACCTAAACCCCGTCACAGTCACCAAAGCCATAGACGCGCTTCTCAAATGGCGTCGCTCCCAATCGGAGACTCAAAAGCCCAAACTCTTCGATCAAGACGAAGAATTTGTGTACCTCGTCGTAACGCTGAAGAAGATTCCGGCGAAATCTCGCGTTAACCCTTACAAGATCCCTCTCCCACACTCCCTGTTCTCGCAGTTCTCAGAACAGTGTCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTGACCAAGGCCCAGGCCCAGGCCAAGGTCCAATCCGAGTCCATCCCCATAGCAAAAATCCTGAAGCTGTCAAAACTGGCATCCGATTATCGTGCTTTTGAGGCGAAGCGGAAGCTCTGTGATTCCTACGATTTGTTTTTTGCAGAGAAGAATATTGTCCCGTTGCTTCCTCGGCTACTTGGGAAGCAATTTTTCAAGAAGAGGAAGTTGCCGGTGCCGGTGGATCTGAAGAAGAGTAACTGGAAGGAGCAGGTGGAGAGGGCGTGCTCGTCCGCGATGCTGTTCATGCGGACCGGCACGTGTAGCGTTGTTAGGGTTGCAAAGGTGGGGATGGAGAGAGACTCAATTGTGGAGAATGTGATGGCTGCGGTTGAGGGGATTGTGGAGGTTGTGCCGAAGAAGTGGGGGAATGTGCGGTCGCTGCATCTGAAGCTGTTGGAGAGTGTGGCGTTGCCTGTGTATCAGGTTGTTCCGGATTTGAAGTTGAGGATTGAGGGTGCTAACGAGCAGGCTGAGATAAAAGAGAAGAAGAAGAAGAGGAAAAACGATGAGGAGGTTCGTGAATCGGCAAAGAAGAAGGGGAGGATTCATGAAGTTAGGTATATGGATGAGAATGGTGGTGAGGATGAGATTGAAAATGAATTGACGAGTGATGATGGTGGTGGCGATGACAATGTGGATGAGAAGAGGAAGAGAGGGGTTTCGAGTGTGTTGAATGGTGAGAAGAGGTTGAAGAAATCGTCTGGTGTCAAGGAGAAGAGGAAAAAGGGGAAGAGTGAAAGTGAGTTGGTTGCTGAGGATAAGGAATCTAGTGCCAAGGACAAGAAGAAAAAGGTGAAGAGTGGGAGTGAATTGGTTATTAGGGATGAAGAATCTGGCGTGAAGAAGACGAAGAAAGGGGAATTGAAGAAGATGAAAACAGGGGAAGTGAAGGTGAAGGCAGTGAAAAGTGTGAAGGCTAAGAAAAGTAAGAAGGCCTAG 1239 0.4948 MASENLNPVTVTKAIDALLKWRRSQSETQKPKLFDQDEEFVYLVVTLKKIPAKSRVNPYKIPLPHSLFSQFSEQCLILDDRPNKARVTKAQAQAKVQSESIPIAKILKLSKLASDYRAFEAKRKLCDSYDLFFAEKNIVPLLPRLLGKQFFKKRKLPVPVDLKKSNWKEQVERACSSAMLFMRTGTCSVVRVAKVGMERDSIVENVMAAVEGIVEVVPKKWGNVRSLHLKLLESVALPVYQVVPDLKLRIEGANEQAEIKEKKKKRKNDEEVRESAKKKGRIHEVRYMDENGGEDEIENELTSDDGGGDDNVDEKRKRGVSSVLNGEKRLKKSSGVKEKRKKGKSESELVAEDKESSAKDKKKKVKSGSELVIRDEESGVKKTKKGELKKMKTGEVKVKAVKSVKAKKSKKA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2358 412 CDD Ribosomal_L1 11 239 IPR028364 -
Vra5g2358 412 MobiDBLite consensus disorder prediction 261 292 - -
Vra5g2358 412 MobiDBLite consensus disorder prediction 261 388 - -
Vra5g2358 412 SUPERFAMILY Ribosomal protein L1 36 240 IPR023674 -
Vra5g2358 412 Coils Coil 243 279 - -
Vra5g2358 412 MobiDBLite consensus disorder prediction 293 307 - -
Vra5g2358 412 Gene3D - 85 177 IPR016095 -
Vra5g2358 412 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 7 288 - -
Vra5g2358 412 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 7 288 - -
Vra5g2358 412 MobiDBLite consensus disorder prediction 308 388 - -
Vra5g2358 412 Pfam Ribosomal protein L1p/L10e family 32 235 IPR028364 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2358 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 2.12e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2358 K14775 - gmx:100815650 504.597