Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2348 ATGAAGCAGCTCATCCGTCGCCTCTCGCGCGTCGCTCACTCCTCAAATTACACGCTCCTCCGCTCCGACTCCTCCTCCTCGTCGCGGGGCTGCCGCCGCCGCCACCGCTCGGAGTCCTTCCGTGCCTCCAAGATCCGCCGCTCCTCCGCAGTGGTGCCGGAGGGGCACGTCCCGATCTACGTCGGCGACGAGATGGAGAGGTTTGTGGTTTGCGCTGAGCTCCTCAACCACCCTGTCTTCGTGCAACTACTCAACGAATCCGCGCAGGAATACGGCTACGAGCAGAAAGGCGTTCTCCGGTTGCCATGCCGCGTCTTCGATTTCGAGCGCGTGCTACACGCGCTCCGCCTTGGCCTCGACGCGCCTGATGTTTCCGAGCTCGTTAACTTCTTGCCGGAAGAATTATCCTGA 411 0.6229 MKQLIRRLSRVAHSSNYTLLRSDSSSSSRGCRRRHRSESFRASKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVQLLNESAQEYGYEQKGVLRLPCRVFDFERVLHALRLGLDAPDVSELVNFLPEELS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2348 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 129 IPR003676 GO:0009733
Vra5g2348 136 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 129 - -
Vra5g2348 136 Pfam Auxin responsive protein 7 115 IPR003676 GO:0009733
Vra5g2348 136 MobiDBLite consensus disorder prediction 20 40 - -
Vra5g2348 136 Coils Coil 132 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2348 Vra-Chr5 30331435 30332331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2348 1 115 Calmodulin-binding Proteins AT2G24400 31.092 1.59e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2348 K14488 - gmx:100793103 199.904