Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2347 ATGGCCTCTGCCAGTGCCACCACTCTCTTCTCATCTAACCCCATGTTTCCCTCTGACTACCATTCTCTCTCCCCCTCTCCAACCATTCCTAAATCCTTCACTGGCCTTTGCAAGCCCTTCCATTCGAGGGTTCCCACTTCCATCCCCTGCTTCCGTTGCAGAAGACCAAAGTTCTTTGTCACAGCCACTGTAATAAAGTGGAGATGTCCAAAGCAAACCATCCCTCCCAATTCTGATACTGGTTTCCAAAAGAAACTCCTCTATCTAGAATCCATTGGCATTGACTCTTTCTCACTTATTGAAAACCATCCAATGCTGATCACTACCTCTCTTACAGACATAAAATCGACTGTGGAATATATCACCTCGATGGATTTCACTGCAACCGAGTTCCGGCGTATGGTTGGCATGTGCCCGGAGATTCTGACCACCAATGTCTCTGACATCATACCGGTGTTCACCTTCCTTCATGACGAGGTACACGTGCATTGTTCAGACATTAAGCGGGTCATAAATCGGCGTCCGAGGTTGCTTGTGTGCAGTGTGAGTAAGCGACTTCGTCCTACCCTATACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAGCATACTGACTTGCTATCATGTAGTGTTGAAGAAAAGTTCATGCCAAGAGTAGATTACTTTGAGAATATTGGGTTTTCTCGGCGTGATGCAACTTTAATGTTTCGCAGATTTCCTCAGCTGTTTTGTTATAGTATTAAAAATAATTTGGAGCCTAAATACAGTTACTTTGTGGTAGAGATGGGGAGAGATTTGAAGGAGCTGATAGAATTTCCACAATATTTCTCATTTAGCCTTGAGAATAGAATTAAGCCTAGGCATAAAAAGTGTGTAGAAATGGGGCTGTGTTTTCCTCTCCCTGTCTTGTTAAAAACAAAGGAAGTGAAATTTCAAAGTAGATTGGAAGTATTTGTAAATTCTTCAACACCCTTGAAAACATCCCCTCTGTGGTGTGCTGGCTCTGATTTTTATCAAGTATAG 1026 0.4279 MASASATTLFSSNPMFPSDYHSLSPSPTIPKSFTGLCKPFHSRVPTSIPCFRCRRPKFFVTATVIKWRCPKQTIPPNSDTGFQKKLLYLESIGIDSFSLIENHPMLITTSLTDIKSTVEYITSMDFTATEFRRMVGMCPEILTTNVSDIIPVFTFLHDEVHVHCSDIKRVINRRPRLLVCSVSKRLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRVDYFENIGFSRRDATLMFRRFPQLFCYSIKNNLEPKYSYFVVEMGRDLKELIEFPQYFSFSLENRIKPRHKKCVEMGLCFPLPVLLKTKEVKFQSRLEVFVNSSTPLKTSPLWCAGSDFYQV* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2347 341 Pfam mTERF 77 166 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 Pfam mTERF 159 313 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 PANTHER CGI-12 PROTEIN-RELATED 71 325 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 PANTHER OS03G0360600 PROTEIN 71 325 - -
Vra5g2347 341 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 SMART mt_12 234 266 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 SMART mt_12 97 127 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 SMART mt_12 168 199 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 SMART mt_12 200 229 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Vra5g2347 341 Gene3D Transcription termination factor 3, mitochondrial 138 322 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra5g2347 mTERF 3.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2347 K15032 - gmx:100794678 616.305